Evidence Details for LRRC1
Basic Information Top
| Gene Symbol: | LRRC1 ( FLJ10775,FLJ11834,LANO,dJ523E19.1 ) |
|---|---|
| Gene Full Name: | leucine rich repeat containing 1 |
| Band: | 6p12.1 |
| Quick Links | Entrez ID:55227; OMIM: 608195; Uniprot ID:LRRC1_HUMAN; ENSEMBL ID: ENSG00000137269; HGNC ID: 14307 |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>LRRC1|55227|nucleotide
ATGTTCCACTGCATCCCCCTGTGGCGGTGCAACCGTCATGTGGAGAGCATCGACAAGCGCCACTGCTCGCTGGTCTACGTCCCCGAGGAGATCTACCGCTATGCC
CGGAGCCTGGAGGAGCTGCTGCTGGACGCCAACCAGCTCCGCGAGCTGCCCGAGCAATTTTTCCAGCTAGTCAAATTACGAAAGCTTGGACTTAGTGATAATGAA
ATTCAGCGGCTCCCTCCAGAAATAGCAAACTTCATGCAGCTGGTGGAACTAGATGTGTCTCGAAATGAGATTCCTGAAATTCCAGAAAGCATTTCATTCTGTAAA
GCACTGCAGGTAGCTGACTTCAGCGGAAACCCACTGACTAGGTTGCCAGAAAGCTTTCCTGAATTACAGAATTTAACATGTCTTTCTGTAAATGACATCTCACTA
CAGTCTCTACCTGAAAATATTGGCAATCTTTATAACCTGGCTTCACTGGAACTGAGAGAGAATCTTCTTACATATCTTCCTGACTCTCTTACCCAGCTGCGAAGA
CTAGAAGAACTTGATTTAGGAAACAATGAAATATATAATTTGCCAGAATCAATTGGAGCCCTCTTACATCTAAAAGATCTCTGGTTGGATGGAAATCAACTGTCA
GAATTACCTCAGGAAATAGGAAATCTGAAGAACCTGCTGTGTTTAGATGTCTCTGAAAACAGGTTGGAAAGACTTCCTGAAGAAATCAGTGGCCTGACTTCATTA
ACGGATTTAGTCATTTCCCAGAACTTATTAGAAACGATTCCGGATGGCATTGGAAAACTAAAGAAACTGTCAATCTTGAAGGTGGATCAGAATAGACTCACACAG
TTGCCTGAAGCAGTTGGGGAATGTGAAAGTCTCACTGAGTTAGTTCTTACAGAAAATCAGCTCCTGACCCTGCCTAAAAGCATTGGAAAACTAAAGAAGTTGAGC
AACTTGAATGCAGACAGAAATAAATTAGTGTCCTTACCAAAAGAGATCGGCGGGTGCTGCAGCCTCACTGTGTTCTGTGTACGTGACAACAGACTAACTCGGATA
CCTGCAGAGGTGTCACAGGCAACAGAACTTCATGTCCTGGATGTGGCAGGGAACAGGTTGCTGCATCTACCTTTATCCCTGACTGCCTTGAAGTTGAAGGCTCTG
Show »
ATGTTCCACTGCATCCCCCTGTGGCGGTGCAACCGTCATGTGGAGAGCATCGACAAGCGCCACTGCTCGCTGGTCTACGTCCCCGAGGAGATCTACCGCTATGCC
CGGAGCCTGGAGGAGCTGCTGCTGGACGCCAACCAGCTCCGCGAGCTGCCCGAGCAATTTTTCCAGCTAGTCAAATTACGAAAGCTTGGACTTAGTGATAATGAA
ATTCAGCGGCTCCCTCCAGAAATAGCAAACTTCATGCAGCTGGTGGAACTAGATGTGTCTCGAAATGAGATTCCTGAAATTCCAGAAAGCATTTCATTCTGTAAA
GCACTGCAGGTAGCTGACTTCAGCGGAAACCCACTGACTAGGTTGCCAGAAAGCTTTCCTGAATTACAGAATTTAACATGTCTTTCTGTAAATGACATCTCACTA
CAGTCTCTACCTGAAAATATTGGCAATCTTTATAACCTGGCTTCACTGGAACTGAGAGAGAATCTTCTTACATATCTTCCTGACTCTCTTACCCAGCTGCGAAGA
CTAGAAGAACTTGATTTAGGAAACAATGAAATATATAATTTGCCAGAATCAATTGGAGCCCTCTTACATCTAAAAGATCTCTGGTTGGATGGAAATCAACTGTCA
GAATTACCTCAGGAAATAGGAAATCTGAAGAACCTGCTGTGTTTAGATGTCTCTGAAAACAGGTTGGAAAGACTTCCTGAAGAAATCAGTGGCCTGACTTCATTA
ACGGATTTAGTCATTTCCCAGAACTTATTAGAAACGATTCCGGATGGCATTGGAAAACTAAAGAAACTGTCAATCTTGAAGGTGGATCAGAATAGACTCACACAG
TTGCCTGAAGCAGTTGGGGAATGTGAAAGTCTCACTGAGTTAGTTCTTACAGAAAATCAGCTCCTGACCCTGCCTAAAAGCATTGGAAAACTAAAGAAGTTGAGC
AACTTGAATGCAGACAGAAATAAATTAGTGTCCTTACCAAAAGAGATCGGCGGGTGCTGCAGCCTCACTGTGTTCTGTGTACGTGACAACAGACTAACTCGGATA
CCTGCAGAGGTGTCACAGGCAACAGAACTTCATGTCCTGGATGTGGCAGGGAACAGGTTGCTGCATCTACCTTTATCCCTGACTGCCTTGAAGTTGAAGGCTCTG
Show »
>LRRC1|55227|protein
MFHCIPLWRCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK
ALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS
ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLS
NLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDNQSQPLLTFQTDTDYTTGEKILTCVLLPQLP
SEPTCQENLPRCGALENLVNDVSDEAWNERAVNRVSAIRFVEDEKDEEDNETRTLLRRATPHPGELKHMKKTVENLRNDMNAAKGLDSNKNEVNHAIDRVTTSV
Show »
MFHCIPLWRCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK
ALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS
ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLS
NLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDNQSQPLLTFQTDTDYTTGEKILTCVLLPQLP
SEPTCQENLPRCGALENLVNDVSDEAWNERAVNRVSAIRFVEDEKDEEDNETRTLLRRATPHPGELKHMKKTVENLRNDMNAAKGLDSNKNEVNHAIDRVTTSV
Show »
Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 2 (2) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 8 (2) |
Syndromic Autism Gene TopGenome-Wide Association Studies (By Ethnic Group) Top Family Based Association Studies: 1
| Reference | Stage | Platform | #Families | Affecteds | Result | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ (range) |
||||||
| CAUCASIAN | |||||||||||
| Wang, 2009_1 | Discovery | Illumina HumanHap550 BeadChip | 780 | 1299 (-) |  | | ASD | - - |
- - | ||
Case Control Based Association Studies: 1
| Reference | Stage | Platform | ASD Cases | Normal Controls | Result | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ | #Subjects (% Women) |
Age (range) |
|||||
| CAUCASIAN | ||||||||||||
| Wang, 2009_2 | Discovery | Illumina HumanHap550 BeadChip | 1204 (-) | | | ASD | 10.3±6.6 - |
10.9±6.7 | 6491 (-) |
8.8±5.4 - | ||
CNV Studies TopLinkage Studies TopLow Scale Association Studies (by Ethnic Group) TopLarge Scale Expression Studies TopNGS de novo Mutation Studies TopNGS Mosaic SNV Studies TopNGS Other Studies Top Low Scale Gene Studies TopContact Us if you are an author of a study regarding this gene and do not find your study in this table or find errors in the representation of your study details.