AutismKB 2.0

Evidence Details for LSG1


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Basic Information Top
Gene Symbol:LSG1 ( FLJ11301,FLJ27294 )
Gene Full Name: large subunit GTPase 1 homolog (S. cerevisiae)
Band: 3q29
Quick LinksEntrez ID:55341; OMIM: 610780; Uniprot ID:LSG1_HUMAN; ENSEMBL ID: ENSG00000041802; HGNC ID: 25652
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>LSG1|55341|nucleotide
ATGGGCCGGAGGAGAGCCCCGGCCGGTGGGTCGCTGGGACGGGCCCTTATGCGCCATCAGACTCAGCGGAGCCGAAGCCATCGTCACACTGACTCCTGGTTGCAC
ACAAGTGAACTCAATGATGGCTATGATTGGGGTCGTCTTAATCTTCAGTCAGTGACTGAACAGAGCTCCCTTGATGACTTCCTTGCTACTGCAGAACTTGCAGGA
ACAGAGTTTGTAGCTGAGAAACTTAATATTAAGTTTGTGCCTGCTGAGGCTAGAACTGGACTACTGTCTTTCGAGGAGAGCCAGAGAATTAAGAAGCTCCATGAA
GAAAACAAACAGTTCTTGTGTATACCGAGGAGACCAAACTGGAACCAAAATACTACCCCAGAAGAACTCAAACAAGCAGAGAAAGATAACTTTCTAGAATGGAGA
CGTCAGCTTGTCCGGCTAGAAGAGGAACAGAAGCTGATATTGACTCCATTTGAACGAAATTTGGACTTTTGGCGCCAGCTCTGGAGAGTCATTGAGAGAAGTGAT
ATTGTGGTCCAGATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAGGATTTGGAATGTTATGTGAAAGAAATGGATGCCAATAAGGAGAACGTCATTCTG
ATCAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGAGTGCCTGGGCCATGTACTTCGAAAAAGAAGATGTGAAGGTTATTTTCTGGTCAGCTTTGGCCGGAGCC
ATTCCCCTGAATGGTGACTCTGAGGAAGAGGCAAACAGAGATGATAGACAAAGCAACACAACCAAGTTTGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCAC
AGTGAATCCGAACATCTCCCAGCTAGGGATTCTCCTTCACTTAGTGAAAATCCCACAACGGATGAAGATGACAGTGAGTATGAGGACTGTCCAGAGGAGGAGGAA
GACGACTGGCAGACGTGCTCAGAAGAAGACGGTCCCAAGGAAGAGGACTGCAGCCAGGACTGGAAGGAAAGCTCTACTGCAGATTCTGAGGCTCGGAGCAGGAAA
ACCCCACAGAAGAGGCAGATACACAATTTTAGCCATCTGGTATCCAAGCAGGAGTTACTGGAGCTCTTTAAGGAGCTACACACTGGGAGAAAGGTGAAAGATGGG
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>LSG1|55341|protein
MGRRRAPAGGSLGRALMRHQTQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLDDFLATAELAGTEFVAEKLNIKFVPAEARTGLLSFEESQRIKKLHE
ENKQFLCIPRRPNWNQNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVIL
INKADLLTAEQRSAWAMYFEKEDVKVIFWSALAGAIPLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHLPARDSPSLSENPTTDEDDSEYEDCPEEEE
DDWQTCSEEDGPKEEDCSQDWKESSTADSEARSRKTPQKRQIHNFSHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGH
TKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQ
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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (0) 1 (3) 1 (1) 0 (0) 0 (0) 0 (1) 0 (0) 0 (0) 0 (0) 4 (5)
Syndromic Autism Gene Top
Genome-Wide Association Studies(By Ethnic Group) Top
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Bremer, 2011 - aCGHASD - - - - 223 - 223
Gai, 2011 AGRE SNP microarray--autism - - - - 1224 3801 5025
Farach LS, 2016 - ---autistic - - - - 1 - 1
Linkage Studies Top