Evidence Details for NDNL2
Basic Information Top
| Gene Symbol: | NDNL2 ( HCA4,MAGEG1,MAGEL3,NSE3,NSMCE3 ) |
|---|---|
| Gene Full Name: | necdin-like 2 |
| Band: | 15q13.1 |
| Quick Links | Entrez ID:56160; OMIM: 608243; Uniprot ID:MAGG1_HUMAN; ENSEMBL ID: ENSG00000185115; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>NDNL2|56160|nucleotide
ATGTTGCAAAAACCGAGGAACCGGGGCCGCTCTGGCGGCCAGGCCGAGAGGGACAGAGACTGGAGCCATAGCGGAAACCCCGGGGCTTCGCGGGCCGGGGAAGAC
GCCCGGGTTCTCAGAGACGGCTTTGCCGAGGAGGCCCCGAGCACGTCCCGCGGGCCGGGCGGCTCGCAGGGGTCGCAGGGCCCCTCGCCTCAGGGCGCCCGCCGG
GCCCAGGCCGCCCCCGCCGTGGGGCCCAGGAGCCAGAAGCAGCTGGAGCTGAAAGTGTCCGAGCTGGTGCAGTTCTTGCTGATTAAAGACCAGAAGAAGATTCCG
ATCAAGCGGGCCGACATACTGAAGCACGTCATCGGGGACTACAAGGACATCTTCCCCGACCTCTTCAAACGGGCCGCCGAGCGCCTCCAGTACGTCTTCGGGTAT
AAGCTGGTGGAACTTGAACCCAAGAGCAACACTTACATCCTCATCAACACCCTGGAGCCTGTGGAGGAGGATGCCGAGATGAGGGGTGACCAAGGCACGCCCACT
ACGGGCCTCCTGATGATCGTCTTAGGGCTCATCTTTATGAAGGGCAACACCATCAAGGAAACTGAAGCCTGGGACTTTCTGCGGCGCTTAGGGGTCTACCCCACC
AAGAAGCATTTAATTTTCGGAGATCCAAAGAAACTCATTACTGAGGACTTTGTGCGACAGCGTTACCTGGAATACCGGCGGATACCCCACACCGACCCCGTCGAC
TACGAATTCCAGTGGGGCCCGCGAACCAACCTGGAAACCAGCAAGATGAAAGTTCTTAAGTTTGTGGCCAAGGTCCATAATCAAGACCCCAAGGACTGGCCAGCG
CAGTACTGTGAGGCTTTGGCAGATGAGGAGAACAGGGCCAGACCTCAGCCTAGTGGCCCAGCTCCATCCTCTTGA
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ATGTTGCAAAAACCGAGGAACCGGGGCCGCTCTGGCGGCCAGGCCGAGAGGGACAGAGACTGGAGCCATAGCGGAAACCCCGGGGCTTCGCGGGCCGGGGAAGAC
GCCCGGGTTCTCAGAGACGGCTTTGCCGAGGAGGCCCCGAGCACGTCCCGCGGGCCGGGCGGCTCGCAGGGGTCGCAGGGCCCCTCGCCTCAGGGCGCCCGCCGG
GCCCAGGCCGCCCCCGCCGTGGGGCCCAGGAGCCAGAAGCAGCTGGAGCTGAAAGTGTCCGAGCTGGTGCAGTTCTTGCTGATTAAAGACCAGAAGAAGATTCCG
ATCAAGCGGGCCGACATACTGAAGCACGTCATCGGGGACTACAAGGACATCTTCCCCGACCTCTTCAAACGGGCCGCCGAGCGCCTCCAGTACGTCTTCGGGTAT
AAGCTGGTGGAACTTGAACCCAAGAGCAACACTTACATCCTCATCAACACCCTGGAGCCTGTGGAGGAGGATGCCGAGATGAGGGGTGACCAAGGCACGCCCACT
ACGGGCCTCCTGATGATCGTCTTAGGGCTCATCTTTATGAAGGGCAACACCATCAAGGAAACTGAAGCCTGGGACTTTCTGCGGCGCTTAGGGGTCTACCCCACC
AAGAAGCATTTAATTTTCGGAGATCCAAAGAAACTCATTACTGAGGACTTTGTGCGACAGCGTTACCTGGAATACCGGCGGATACCCCACACCGACCCCGTCGAC
TACGAATTCCAGTGGGGCCCGCGAACCAACCTGGAAACCAGCAAGATGAAAGTTCTTAAGTTTGTGGCCAAGGTCCATAATCAAGACCCCAAGGACTGGCCAGCG
CAGTACTGTGAGGCTTTGGCAGATGAGGAGAACAGGGCCAGACCTCAGCCTAGTGGCCCAGCTCCATCCTCTTGA
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>NDNL2|56160|protein
MLQKPRNRGRSGGQAERDRDWSHSGNPGASRAGEDARVLRDGFAEEAPSTSRGPGGSQGSQGPSPQGARRAQAAPAVGPRSQKQLELKVSELVQFLLIKDQKKIP
IKRADILKHVIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYILINTLEPVEEDAEMRGDQGTPTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPT
KKHLIFGDPKKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYCEALADEENRARPQPSGPAPSS
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MLQKPRNRGRSGGQAERDRDWSHSGNPGASRAGEDARVLRDGFAEEAPSTSRGPGGSQGSQGPSPQGARRAQAAPAVGPRSQKQLELKVSELVQFLLIKDQKKIP
IKRADILKHVIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYILINTLEPVEEDAEMRGDQGTPTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPT
KKHLIFGDPKKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYCEALADEENRARPQPSGPAPSS
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Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 0 (0) | 2 (18) | 1 (1) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 6 (19) |
Syndromic Autism Gene TopGenome-Wide Association Studies(By Ethnic Group) TopCNV Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Wolpert, 2000 | - | STS mapping |  |  | autism | 3 | - | 3 | - | 3 | - | 3 |
| Wassink, 2001 | USA | Chromosomal analysis of G-band | | | autism | - | - | - | - | 278 | - | 278 |
| Silva, 2002 | - | FISH | | | autism | - | - | - | - | 1 | - | 1 |
| Keller, 2003 | USA | FISH | | | ASD | - | - | - | - | 2 | - | 2 |
| Mann, 2004 | - | STS mapping | | | PDD-NOS | - | - | - | - | 2 | - | 2 |
| Bolton, 2004 | UK | STS mapping | | | ASD | - | - | - | - | 181 | 40 | 221 |
| Sahoo, 2005 | USA | aCGH | | | autism | - | - | - | - | 9 | - | 9 |
| Jacquemont, 2006 | France | aCGH | | | ASD | - | - | - | - | 29 | - | 29 |
| Kwasnicka-Crawford, 2007 | - | STS mapping | | | autism | - | - | - | - | 1 | - | 1 |
| Wassink, 2007 | USA | FISH | | | PDD | - | - | - | - | 104 | - | 104 |
| Sebat, 2007 | USA | aCGH | | | autism | 165 | 118 | 47 | 99 | 195 | 196 | 391 |
| Marshall, 2008 | - | SNP microarray | | | ASD | 427 | 238 | 189 | - | 427 | 500 | 927 |
| Weiss, 2008 | USA, Ireland | aCGH, SNP microarray | | | ASD | 751 | - | - | - | 2252 | 23502 | 25754 |
| Gregory, 2009 | USA | aCGH | | | ASD | - | - | - | - | 119 | 54 | 173 |
| Bremer, 2009 | - | aCGH | | | ASD | - | - | - | - | 148 | - | 148 |
| Pinto, 2010 | - | SNP microarray, qPCR | | | ASD | - | - | - | - | 996 | 1287 | 2283 |
| Sanders, 2011 | Simons Simplex Collection | SNP microarray | - | - | ASD | 1127 | 1127 | - | - | - | - | - |
| Mercati O, 2017 | - | - | | | ASD | - | - | - | - | 1534 | 8936 | - |
Linkage Studies Top