Evidence Details for TSHZ3
Basic Information Top
| Gene Symbol: | TSHZ3 ( FLJ54422,KIAA1474,TSH3,ZNF537 ) |
|---|---|
| Gene Full Name: | teashirt zinc finger homeobox 3 |
| Band: | 19q12 |
| Quick Links | Entrez ID:57616; OMIM: NA; Uniprot ID:TSH3_HUMAN; ENSEMBL ID: ENSG00000121297; HGNC ID: 30700 |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>TSHZ3|57616|nucleotide
ATGCCGAGGAGGAAGCAGCAGGCGCCCCGGCGCGCAGCAGCCTATGTTTCCGAAGAGTTAAAGGCTGCTGCCCTGGTGGACGAAGGTTTAGACCCAGAGGAGCAT
ACGGCAGATGGAGAGCCCTCGGCCAAGTACATGTGCCCGGAGAAGGAGCTCGCCAGGGCCTGCCCCAGCTACCAGAACTCCCCGGCCGCCGAGTTTTCCTGCCAT
GAAATGGACAGCGAGTCACACATCAGTGAGACCAGTGACCGAATGGCTGACTTTGAAAGCGGCTCCATCAAGAACGAAGAGGAGACCAAGGAGGTCACGGTCCCA
CTGGAAGACACGACTGTGTCGGATAGCCTGGAGCAGATGAAGGCCGTGTACAACAACTTCCTCTCCAACTCCTACTGGTCCAACCTCAACCTCAACCTGCACCAG
CCCTCCTCGGAGAAGAACAACGGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCTGTGGCAGCGGGAGCTTCGACTGGCACCAGAGCGCCATGGCTAAGACG
CTGCAGCAGGTGTCACAGAGCCGCATGCTCCCGGAGCCCAGCCTCTTCAGCACCGTGCAGCTGTACCGGCAGAGCAGCAAGCTCTATGGCTCCATCTTCACGGGG
GCCAGCAAGTTCCGCTGTAAGGACTGCAGCGCTGCCTACGACACCCTGGTGGAGTTGACGGTGCACATGAACGAGACGGGGCATTACCGCGACGACAACCATGAG
ACCGATAACAACAACCCCAAGCGCTGGTCCAAGCCTCGCAAACGCTCCTTGCTGGAAATGGAAGGGAAGGAAGACGCCCAGAAGGTGCTGAAGTGCATGTACTGT
GGCCACTCCTTTGAGTCCCTGCAGGATTTGAGTGTCCATATGATCAAAACAAAACACTACCAAAAAGTGCCTCTGAAGGAACCCGTCACTCCTGTCGCCGCCAAA
ATCATCCCTGCCACTCGGAAGAAAGCTTCCCTGGAGCTGGAGCTCCCCAGCTCCCCAGATTCCACAGGTGGAACCCCCAAAGCCACCATCTCAGACACCAACGAT
GCACTTCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGCCACCAGAATGGGGCCAGCTATGCATGGCACTTTGAGGCCCGGAAGTCGCAGATC
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ATGCCGAGGAGGAAGCAGCAGGCGCCCCGGCGCGCAGCAGCCTATGTTTCCGAAGAGTTAAAGGCTGCTGCCCTGGTGGACGAAGGTTTAGACCCAGAGGAGCAT
ACGGCAGATGGAGAGCCCTCGGCCAAGTACATGTGCCCGGAGAAGGAGCTCGCCAGGGCCTGCCCCAGCTACCAGAACTCCCCGGCCGCCGAGTTTTCCTGCCAT
GAAATGGACAGCGAGTCACACATCAGTGAGACCAGTGACCGAATGGCTGACTTTGAAAGCGGCTCCATCAAGAACGAAGAGGAGACCAAGGAGGTCACGGTCCCA
CTGGAAGACACGACTGTGTCGGATAGCCTGGAGCAGATGAAGGCCGTGTACAACAACTTCCTCTCCAACTCCTACTGGTCCAACCTCAACCTCAACCTGCACCAG
CCCTCCTCGGAGAAGAACAACGGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCTGTGGCAGCGGGAGCTTCGACTGGCACCAGAGCGCCATGGCTAAGACG
CTGCAGCAGGTGTCACAGAGCCGCATGCTCCCGGAGCCCAGCCTCTTCAGCACCGTGCAGCTGTACCGGCAGAGCAGCAAGCTCTATGGCTCCATCTTCACGGGG
GCCAGCAAGTTCCGCTGTAAGGACTGCAGCGCTGCCTACGACACCCTGGTGGAGTTGACGGTGCACATGAACGAGACGGGGCATTACCGCGACGACAACCATGAG
ACCGATAACAACAACCCCAAGCGCTGGTCCAAGCCTCGCAAACGCTCCTTGCTGGAAATGGAAGGGAAGGAAGACGCCCAGAAGGTGCTGAAGTGCATGTACTGT
GGCCACTCCTTTGAGTCCCTGCAGGATTTGAGTGTCCATATGATCAAAACAAAACACTACCAAAAAGTGCCTCTGAAGGAACCCGTCACTCCTGTCGCCGCCAAA
ATCATCCCTGCCACTCGGAAGAAAGCTTCCCTGGAGCTGGAGCTCCCCAGCTCCCCAGATTCCACAGGTGGAACCCCCAAAGCCACCATCTCAGACACCAACGAT
GCACTTCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGCCACCAGAATGGGGCCAGCTATGCATGGCACTTTGAGGCCCGGAAGTCGCAGATC
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>TSHZ3|57616|protein
MPRRKQQAPRRAAAYVSEELKAAALVDEGLDPEEHTADGEPSAKYMCPEKELARACPSYQNSPAAEFSCHEMDSESHISETSDRMADFESGSIKNEEETKEVTVP
LEDTTVSDSLEQMKAVYNNFLSNSYWSNLNLNLHQPSSEKNNGSSSSSSSSSSSCGSGSFDWHQSAMAKTLQQVSQSRMLPEPSLFSTVQLYRQSSKLYGSIFTG
ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVTPVAAK
IIPATRKKASLELELPSSPDSTGGTPKATISDTNDALQKNSNPYITPNNRYGHQNGASYAWHFEARKSQILKCMECGSSHDTLQELTAHMMVTGHFIKVTNSAMK
KGKPIVETPVTPTITTLLDEKVQSVPLAATTFTSPSNTPASISPKLNVEVKKEVDKEKAVTDEKPKQKDKPGEEEEKCDISSKYHYLTENDLEESPKGGLDILKS
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MPRRKQQAPRRAAAYVSEELKAAALVDEGLDPEEHTADGEPSAKYMCPEKELARACPSYQNSPAAEFSCHEMDSESHISETSDRMADFESGSIKNEEETKEVTVP
LEDTTVSDSLEQMKAVYNNFLSNSYWSNLNLNLHQPSSEKNNGSSSSSSSSSSSCGSGSFDWHQSAMAKTLQQVSQSRMLPEPSLFSTVQLYRQSSKLYGSIFTG
ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVTPVAAK
IIPATRKKASLELELPSSPDSTGGTPKATISDTNDALQKNSNPYITPNNRYGHQNGASYAWHFEARKSQILKCMECGSSHDTLQELTAHMMVTGHFIKVTNSAMK
KGKPIVETPVTPTITTLLDEKVQSVPLAATTFTSPSNTPASISPKLNVEVKKEVDKEKAVTDEKPKQKDKPGEEEEKCDISSKYHYLTENDLEESPKGGLDILKS
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Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 0 (1) | 0 (0) | 1 (2) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (1) | 0 (0) | 2 (4) |
Syndromic Autism Gene TopGenome-Wide Association Studies (By Ethnic Group) Top Family Based Association Studies: 1
| Reference | Stage | Platform | #Families | Affecteds | Result | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ (range) |
||||||
| CAUCASIAN | |||||||||||
| Hussman, 2011_1 | Discovery | Illumina Infinium Human 1 M beadship | 597 | - (-) |  |  | ASD | - - |
- - | ||
Case Control Based Association Studies: 0
| Reference | Stage | Platform | ASD Cases | Normal Controls | Result | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ | #Subjects (% Women) |
Age (range) |
|||||
| No Evidence. | ||||||||||||
CNV Studies TopLinkage Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Bailey, 1998 | - | microsatellite-based genomic screen | | | PDD | 99 | - | 99 | - | - | - | - |
| Liu, 2001 | USA | microsatellite-based genomic screen | | | autism, ASD | 110 | - | 110 | - | - | - | - |
Low Scale Association Studies (by Ethnic Group) TopLarge Scale Expression Studies TopNGS de novo Mutation Studies TopNGS Mosaic SNV Studies TopNGS Other Studies Top| Reference | Source | Platform | ADI-R | ADOS | Diagnosis | Family | Affected | Validation Method | ||
|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | ||||||||
| Doan RN, 2016 | - | - | - | - | ASD | - | - | - | - | - |
Low Scale Gene Studies TopContact Us if you are an author of a study regarding this gene and do not find your study in this table or find errors in the representation of your study details.