Evidence Details for VAT1L
Basic Information Top
| Gene Symbol: | VAT1L ( KIAA1576 ) |
|---|---|
| Gene Full Name: | vesicle amine transport protein 1 homolog (T. californica)-like |
| Band: | 16q23.1 |
| Quick Links | Entrez ID:57687; OMIM: NA; Uniprot ID:VAT1L_HUMAN; ENSEMBL ID: ENSG00000171724; HGNC ID: 29315 |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>VAT1L|57687|nucleotide
ATGGCCAAGGAAGGCGTGGAGAAGGCGGAGGAGACGGAGCAAATGATCGAGAAGGAGGCAGGCAAGGAGCCGGCGGAGGGCGGCGGCGGCGACGGCTCGCACCGC
CTCGGGGACGCCCAGGAGATGCGCGCGGTGGTGCTGGCTGGCTTCGGGGGGCTCAACAAGCTGCGGCTCTTCAGGAAGGCCATGCCCGAGCCTCAGGACGGCGAG
CTCAAGATCCGCGTCAAAGCCTGTGGATTAAACTTCATTGACTTGATGGTGCGACAAGGGAATATTGACAACCCTCCCAAGACTCCCCTGGTGCCAGGATTTGAG
TGTTCTGGGATTGTTGAAGCTCTGGGGGACAGCGTGAAAGGATATGAGATTGGAGACCGTGTCATGGCATTTGTCAATTACAATGCCTGGGCAGAGGTGGTCTGC
ACACCAGTGGAGTTTGTCTACAAGATCCCGGATGACATGAGCTTCTCGGAGGCTGCTGCATTCCCCATGAACTTCGTCACAGCCTATGTGATGCTGTTTGAAGTT
GCCAACCTCCGGGAAGGGATGTCTGTGCTCGTGCACTCAGCTGGTGGGGGCGTGGGTCAAGCTGTGGCTCAGCTGTGTTCCACTGTCCCCAACGTGACTGTCTTT
GGAACAGCCTCTACTTTCAAGCATGAAGCAATCAAAGACTCTGTGACCCACCTCTTTGACAGAAATGCAGACTACGTGCAAGAAGTTAAAAGAATCTCTGCTGAA
GGTGTGGACATCGTTTTGGATTGCCTCTGTGGGGACAACACTGGAAAAGGTCTCAGTCTTCTCAAACCCCTGGGAACCTACATTTTATATGGCTCATCCAACATG
GTAACTGGAGAGACCAAGAGCTTCTTCAGCTTTGCAAAATCATGGTGGCAGGTGGAGAAGGTGAACCCCATCAAGCTGTATGAGGAGAACAAAGTCATCGCGGGG
TTTTCCCTTTTAAATCTGCTCTTCAAACAAGGCCGGGCGGGCCTCATTCGGGGAGTGGTGGAAAAACTCATAGGGCTCTACAACCAGAAGAAGATCAAGCCTGTG
GTGGACTCCTTGTGGGCTCTGGAGGAGGTGAAGGAGGCCATGCAGCGGATTCACGACCGAGGGAACATTGGCAAGTTAATTCTGGATGTAGAAAAGACCCCAACT
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ATGGCCAAGGAAGGCGTGGAGAAGGCGGAGGAGACGGAGCAAATGATCGAGAAGGAGGCAGGCAAGGAGCCGGCGGAGGGCGGCGGCGGCGACGGCTCGCACCGC
CTCGGGGACGCCCAGGAGATGCGCGCGGTGGTGCTGGCTGGCTTCGGGGGGCTCAACAAGCTGCGGCTCTTCAGGAAGGCCATGCCCGAGCCTCAGGACGGCGAG
CTCAAGATCCGCGTCAAAGCCTGTGGATTAAACTTCATTGACTTGATGGTGCGACAAGGGAATATTGACAACCCTCCCAAGACTCCCCTGGTGCCAGGATTTGAG
TGTTCTGGGATTGTTGAAGCTCTGGGGGACAGCGTGAAAGGATATGAGATTGGAGACCGTGTCATGGCATTTGTCAATTACAATGCCTGGGCAGAGGTGGTCTGC
ACACCAGTGGAGTTTGTCTACAAGATCCCGGATGACATGAGCTTCTCGGAGGCTGCTGCATTCCCCATGAACTTCGTCACAGCCTATGTGATGCTGTTTGAAGTT
GCCAACCTCCGGGAAGGGATGTCTGTGCTCGTGCACTCAGCTGGTGGGGGCGTGGGTCAAGCTGTGGCTCAGCTGTGTTCCACTGTCCCCAACGTGACTGTCTTT
GGAACAGCCTCTACTTTCAAGCATGAAGCAATCAAAGACTCTGTGACCCACCTCTTTGACAGAAATGCAGACTACGTGCAAGAAGTTAAAAGAATCTCTGCTGAA
GGTGTGGACATCGTTTTGGATTGCCTCTGTGGGGACAACACTGGAAAAGGTCTCAGTCTTCTCAAACCCCTGGGAACCTACATTTTATATGGCTCATCCAACATG
GTAACTGGAGAGACCAAGAGCTTCTTCAGCTTTGCAAAATCATGGTGGCAGGTGGAGAAGGTGAACCCCATCAAGCTGTATGAGGAGAACAAAGTCATCGCGGGG
TTTTCCCTTTTAAATCTGCTCTTCAAACAAGGCCGGGCGGGCCTCATTCGGGGAGTGGTGGAAAAACTCATAGGGCTCTACAACCAGAAGAAGATCAAGCCTGTG
GTGGACTCCTTGTGGGCTCTGGAGGAGGTGAAGGAGGCCATGCAGCGGATTCACGACCGAGGGAACATTGGCAAGTTAATTCTGGATGTAGAAAAGACCCCAACT
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>VAT1L|57687|protein
MAKEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFE
CSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVF
GTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAG
FSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ
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MAKEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFE
CSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVF
GTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAG
FSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ
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Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 0 (0) | 1 (3) | 0 (0) | 0 (0) | 1 (1) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 3 (4) |
Syndromic Autism Gene TopGenome-Wide Association Studies(By Ethnic Group) TopCNV Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Levy, 2011 | Simons Simplex Collection | aCGH | - | - | ASD | 915 | 915 | - | - | - | - | - |
| Sanders, 2011 | Simons Simplex Collection | SNP microarray | - | - | ASD | 1127 | 1127 | - | - | - | - | - |
| Krumm N, 2015 | - | - | - | - | - | 1266 | - | - | - | - | - | - |
Linkage Studies TopLow Scale Association Studies (by Ethnic Group) TopLarge Scale Expression Studies Top Microarray Studies: 1
| Reference | Source | Tissue | #Subjects (% Women) |
ADI-R | ADOS | Endo- pheno | Diagnosis | Normal Controls (% Women) |
Fold Change | Up/ Down | P/Q value | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Voineagu, 2011_1 | Unknown | 16 frontal cortex(BA9) and 13 temporal cortex(BA41 | 16 (25.00%) |  | | - | autism | 16 (6.25%) |
0.885093 | Down | 5.78915 | |
| ||||||||||||
Proteomics Studies:0
| Reference | Source | Tissue | Platform | #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Normal Controls(% Women) | |
|---|---|---|---|---|---|---|---|---|---|
| No Evidence. | |||||||||
NGS de novo Mutation Studies TopNGS Mosaic SNV Studies TopNGS Other Studies Top Low Scale Gene Studies TopContact Us if you are an author of a study regarding this gene and do not find your study in this table or find errors in the representation of your study details.