Evidence Details for SLC7A4
Basic Information Top
| Gene Symbol: | SLC7A4 ( CAT-4,CAT4,HCAT3,MGC129976,MGC129977,VH ) |
|---|---|
| Gene Full Name: | solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 |
| Band: | 22q11.21 |
| Quick Links | Entrez ID:6545; OMIM: 603752; Uniprot ID:CTR4_HUMAN; ENSEMBL ID: ENSG00000099960; HGNC ID: 11062 |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>SLC7A4|6545|nucleotide
ATGGCCCGGGGGCTGCCCACCATTGCTAGCCTGGCACGCTTATGCCAGAAGCTGAACCGCCTGAAGCCGCTGGAGGACTCCACCATGGAGACGTCACTGCGGCGC
TGCCTGTCCACGCTGGACCTGACTCTTCTGGGCGTGGGTGGCATGGTGGGCTCGGGTCTCTACGTGCTCACAGGTGCCGTGGCCAAGGAGGTGGCTGGCCCTGCT
GTGCTCTTGTCCTTCGGTGTGGCCGCTGTGGCCTCCCTGCTGGCAGCCCTATGCTATGCAGAATTTGGGGCACGTGTGCCACGCACGGGCTCTGCCTACCTGTTC
ACCTACGTATCCATGGGCGAGCTGTGGGCCTTCCTCATCGGCTGGAATGTTCTCCTCGAATACATCATCGGTGGCGCCGCCGTGGCCCGTGCCTGGAGTGGCTAC
CTGGACTCTATGTTCAGCCACAGCATCCGCAACTTCACTGAGACCCACGTGGGTTCTTGGCAGGTGCCCCTCCTGGGCCACTACCCGGACTTCCTGGCTGCTGGC
ATCATCCTCCTGGCCTCTGCCTTTGTCTCCTGTGGAGCCCGCGTGTCCTCCTGGCTCAATCACACCTTCTCGGCCATCAGCCTGCTTGTCATTCTCTTCATTGTC
ATCCTGGGCTTCATCCTGGCCCAGCCTCACAACTGGAGCGCTGACGAAGGCGGCTTTGCACCCTTCGGCTTCTCCGGCGTCATGGCCGGCACTGCCTCCTGCTTC
TATGCTTTCGTGGGCTTCGACGTCATTGCCGCCTCCAGTGAGGAGGCCCAGAACCCACGGCGGTCTGTGCCTCTGGCCATCGCCATCTCGCTTGCCATTGCAGCT
GGTGCCTACATCCTTGTCTCCACCGTGCTAACCCTCATGGTGCCCTGGCACAGCCTGGACCCCGACTCAGCGCTTGCAGATGCCTTCTACCAGCGGGGCTACAGG
TGGGCTGGCTTCATCGTGGCAGCTGGCTCCATCTGCGCCATGAACACCGTCCTGCTCAGCCTCCTCTTCTCCCTGCCACGCATTGTCTATGCCATGGCCGCCGAT
GGGCTCTTCTTCCAGGTGTTTGCCCATGTGCACCCCCGGACACAGGTGCCTGTGGCGGGCACCCTGGCGTTCGGGCTCCTCACGGCCTTCCTGGCACTGCTGCTG
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ATGGCCCGGGGGCTGCCCACCATTGCTAGCCTGGCACGCTTATGCCAGAAGCTGAACCGCCTGAAGCCGCTGGAGGACTCCACCATGGAGACGTCACTGCGGCGC
TGCCTGTCCACGCTGGACCTGACTCTTCTGGGCGTGGGTGGCATGGTGGGCTCGGGTCTCTACGTGCTCACAGGTGCCGTGGCCAAGGAGGTGGCTGGCCCTGCT
GTGCTCTTGTCCTTCGGTGTGGCCGCTGTGGCCTCCCTGCTGGCAGCCCTATGCTATGCAGAATTTGGGGCACGTGTGCCACGCACGGGCTCTGCCTACCTGTTC
ACCTACGTATCCATGGGCGAGCTGTGGGCCTTCCTCATCGGCTGGAATGTTCTCCTCGAATACATCATCGGTGGCGCCGCCGTGGCCCGTGCCTGGAGTGGCTAC
CTGGACTCTATGTTCAGCCACAGCATCCGCAACTTCACTGAGACCCACGTGGGTTCTTGGCAGGTGCCCCTCCTGGGCCACTACCCGGACTTCCTGGCTGCTGGC
ATCATCCTCCTGGCCTCTGCCTTTGTCTCCTGTGGAGCCCGCGTGTCCTCCTGGCTCAATCACACCTTCTCGGCCATCAGCCTGCTTGTCATTCTCTTCATTGTC
ATCCTGGGCTTCATCCTGGCCCAGCCTCACAACTGGAGCGCTGACGAAGGCGGCTTTGCACCCTTCGGCTTCTCCGGCGTCATGGCCGGCACTGCCTCCTGCTTC
TATGCTTTCGTGGGCTTCGACGTCATTGCCGCCTCCAGTGAGGAGGCCCAGAACCCACGGCGGTCTGTGCCTCTGGCCATCGCCATCTCGCTTGCCATTGCAGCT
GGTGCCTACATCCTTGTCTCCACCGTGCTAACCCTCATGGTGCCCTGGCACAGCCTGGACCCCGACTCAGCGCTTGCAGATGCCTTCTACCAGCGGGGCTACAGG
TGGGCTGGCTTCATCGTGGCAGCTGGCTCCATCTGCGCCATGAACACCGTCCTGCTCAGCCTCCTCTTCTCCCTGCCACGCATTGTCTATGCCATGGCCGCCGAT
GGGCTCTTCTTCCAGGTGTTTGCCCATGTGCACCCCCGGACACAGGTGCCTGTGGCGGGCACCCTGGCGTTCGGGCTCCTCACGGCCTTCCTGGCACTGCTGCTG
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>SLC7A4|6545|protein
MARGLPTIASLARLCQKLNRLKPLEDSTMETSLRRCLSTLDLTLLGVGGMVGSGLYVLTGAVAKEVAGPAVLLSFGVAAVASLLAALCYAEFGARVPRTGSAYLF
TYVSMGELWAFLIGWNVLLEYIIGGAAVARAWSGYLDSMFSHSIRNFTETHVGSWQVPLLGHYPDFLAAGIILLASAFVSCGARVSSWLNHTFSAISLLVILFIV
ILGFILAQPHNWSADEGGFAPFGFSGVMAGTASCFYAFVGFDVIAASSEEAQNPRRSVPLAIAISLAIAAGAYILVSTVLTLMVPWHSLDPDSALADAFYQRGYR
WAGFIVAAGSICAMNTVLLSLLFSLPRIVYAMAADGLFFQVFAHVHPRTQVPVAGTLAFGLLTAFLALLLDLESLVQFLSLGTLLAYTFVATSIIVLRFQKSSPP
SSPGPASPGPLTKQQSSFSDHLQLVGTVHASVPEPGELKPALRPYLGFLDGYSPGAVVTWALGVMLASAITIGCVLVFGNSTLHLPHWGYILLLLLTSVMFLLSL
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MARGLPTIASLARLCQKLNRLKPLEDSTMETSLRRCLSTLDLTLLGVGGMVGSGLYVLTGAVAKEVAGPAVLLSFGVAAVASLLAALCYAEFGARVPRTGSAYLF
TYVSMGELWAFLIGWNVLLEYIIGGAAVARAWSGYLDSMFSHSIRNFTETHVGSWQVPLLGHYPDFLAAGIILLASAFVSCGARVSSWLNHTFSAISLLVILFIV
ILGFILAQPHNWSADEGGFAPFGFSGVMAGTASCFYAFVGFDVIAASSEEAQNPRRSVPLAIAISLAIAAGAYILVSTVLTLMVPWHSLDPDSALADAFYQRGYR
WAGFIVAAGSICAMNTVLLSLLFSLPRIVYAMAADGLFFQVFAHVHPRTQVPVAGTLAFGLLTAFLALLLDLESLVQFLSLGTLLAYTFVATSIIVLRFQKSSPP
SSPGPASPGPLTKQQSSFSDHLQLVGTVHASVPEPGELKPALRPYLGFLDGYSPGAVVTWALGVMLASAITIGCVLVFGNSTLHLPHWGYILLLLLTSVMFLLSL
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Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 0 (0) | 1 (9) | 1 (1) | 0 (0) | 0 (0) | 0 (1) | 0 (0) | 0 (0) | 0 (0) | 4 (11) |
Syndromic Autism Gene TopGenome-Wide Association Studies(By Ethnic Group) TopCNV Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Roubertie, 2001 | - | FISH |  | | autism | - | - | - | - | 1 | - | 1 |
| Niklasson, 2002 | Sweden | FISH | | | autism | - | - | - | - | 1 | - | 1 |
| Szatmari, 2007 | Europe, North America | SNP microarray |  | | ASD | 1491 | - | - | - | - | - | 0 |
| Ramelli, 2008 | - | FISH | | | ASD | - | - | - | - | 1 | - | 1 |
| Marshall, 2008 | - | SNP microarray | | | ASD | 427 | 238 | 189 | - | 427 | 500 | 927 |
| Pinto, 2010 | - | SNP microarray, qPCR | | | ASD | - | - | - | - | 996 | 1287 | 2283 |
| Bremer, 2011 | - | aCGH | | | ASD | - | - | - | - | 223 | - | 223 |
| Levy, 2011 | Simons Simplex Collection | aCGH | - | - | ASD | 915 | 915 | - | - | - | - | - |
| Sanders, 2011 | Simons Simplex Collection | SNP microarray | - | - | ASD | 1127 | 1127 | - | - | - | - | - |
Linkage Studies Top