AutismKB 2.0

Evidence Details for TNXB


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Basic Information Top
Gene Symbol:TNXB ( HXBL,TENX,TN-X,TNX,TNXB1,TNXB2,TNXBS,XB,XBS )
Gene Full Name: tenascin XB
Band: 6p21.33-p21.32
Quick LinksEntrez ID:7148; OMIM: 600985; Uniprot ID:TENX_HUMAN; ENSEMBL ID: ENSG00000168477; HGNC ID: 11976
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>TNXB|7148|nucleotide
ATGATGCCAGCCCAGTATGCTCTAACCTCCAGCCTGGTTCTCCTGGTGCTGCTGAGCACAGCCAGAGCAGGCCCCTTCTCTTCACGGTCCAATGTGACACTGCCA
GCCCCCCGGCCCCCTCCCCAGCCAGGGGGCCACACAGTGGGGGCTGGAGTGGGAAGCCCCTCTTCTCAGCTTTACGAGCACACAGTGGAAGGAGGGGAGAAGCAG
GTGGTATTCACCCACCGCATTAACCTGCCCCCTTCCACTGGCTGTGGCTGTCCCCCAGGCACCGAGCCCCCAGTCCTTGCTTCAGAGGTACAGGCCCTGAGGGTC
CGTCTAGAGATCCTGGAGGAGTTGGTGAAGGGGCTCAAGGAACAGTGCACTGGGGGATGTTGTCCTGCCTCTGCCCAAGCTGGCACAGGTCAGACAGATGTGCGG
ACCCTCTGCAGTCTCCATGGTGTGTTTGATCTGAGCCGCTGCACCTGTTCCTGTGAGCCAGGCTGGGGTGGGCCCACCTGCTCAGACCCCACAGATGCTGAGATC
CCTCCCTCTTCCCCACCCTCAGCCTCGGGGTCCTGCCCAGATGACTGCAATGATCAGGGTCGCTGTGTCCGTGGTCGTTGCGTGTGCTTTCCCGGCTACACTGGC
CCCAGCTGTGGCTGGCCATCCTGTCCCGGGGACTGCCAAGGCCGTGGGCGCTGCGTGCAGGGCGTGTGTGTGTGCCGGGCAGGCTTCTCAGGCCCCGACTGCAGC
CAGCGCTCCTGCCCTCGAGGTTGCAGCCAGAGGGGACGCTGTGAGGGTGGGCGCTGCGTGTGTGACCCAGGCTACACTGGTGACGACTGTGGCATGAGGAGCTGC
CCTCGCGGTTGCAGTCAGAGGGGGCGCTGTGAGAATGGGCGCTGCGTGTGTAACCCCGGCTACACTGGCGAGGACTGTGGGGTGAGGAGCTGCCCTCGGGGCTGC
AGCCAGCGGGGACGCTGCAAGGACGGGCGCTGCGTGTGTGACCCCGGCTACACTGGCGAGGACTGTGGTACGCGGAGCTGCCCCTGGGACTGTGGCGAGGGCGGG
CGCTGCGTGGACGGCCGCTGCGTGTGCTGGCCCGGGTACACAGGCGAGGACTGCAGCACGCGGACATGTCCGAGGGACTGCCGGGGCCGCGGGCGCTGCGAGGAC
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>TNXB|7148|protein
MMPAQYALTSSLVLLVLLSTARAGPFSSRSNVTLPAPRPPPQPGGHTVGAGVGSPSSQLYEHTVEGGEKQVVFTHRINLPPSTGCGCPPGTEPPVLASEVQALRV
RLEILEELVKGLKEQCTGGCCPASAQAGTGQTDVRTLCSLHGVFDLSRCTCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDDCNDQGRCVRGRCVCFPGYTG
PSCGWPSCPGDCQGRGRCVQGVCVCRAGFSGPDCSQRSCPRGCSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQRGRCENGRCVCNPGYTGEDCGVRSCPRGC
SQRGRCKDGRCVCDPGYTGEDCGTRSCPWDCGEGGRCVDGRCVCWPGYTGEDCSTRTCPRDCRGRGRCEDGECICDTGYSGDDCGVRSCPGDCNQRGRCEDGRCV
CWPGYTGTDCGSRACPRDCRGRGRCENGVCVCNAGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGFTGEDCGS
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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (0) 1 (2) 0 (0) 0 (0) 0 (0) 0 (1) 0 (0) 0 (1) 0 (0) 2 (4)
Syndromic Autism Gene Top
Genome-Wide Association Studies(By Ethnic Group) Top
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Gregory, 2009 USA aCGHASD - - - - 119 54 173
Berkel, 2010 Canada SNP microarrayASD - - - - 396 5023 5419
Linkage Studies Top