Evidence Details for HMBOX1
Basic Information Top
| Gene Symbol: | HMBOX1 ( FLJ21616,HNF1LA,PBHNF ) |
|---|---|
| Gene Full Name: | homeobox containing 1 |
| Band: | 8p21.1-p12 |
| Quick Links | Entrez ID:79618; OMIM: NA; Uniprot ID:HMBX1_HUMAN; ENSEMBL ID: ENSG00000147421; HGNC ID: 26137 |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>HMBOX1|79618|nucleotide
ATGCTTAGTTCCTTTCCAGTGGTTTTGCTGGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGACTTCGGCGT
ACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCATAGTGACAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGT
TCATATGGGAATAGTACTAACAATGTCCCAGCATCTTCCTCTACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTAT
GATACTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTCACCAACTCGCTACCATGCAAAC
AGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAG
GAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTTGCAGCAGGGA
TCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATA
GAGGACCCTGAATGGAGACAAACGCCTCCCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCT
GTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATGCAGTTATACAGAAGCCAGGCAAAAAGCTG
TCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGAAGCAGCAATCCTGGAGAGT
CATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATGACAGTACGAGCCATAGTGACCACCAA
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ATGCTTAGTTCCTTTCCAGTGGTTTTGCTGGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGACTTCGGCGT
ACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCATAGTGACAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGT
TCATATGGGAATAGTACTAACAATGTCCCAGCATCTTCCTCTACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTAT
GATACTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTCACCAACTCGCTACCATGCAAAC
AGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAG
GAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTTGCAGCAGGGA
TCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATA
GAGGACCCTGAATGGAGACAAACGCCTCCCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCT
GTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATGCAGTTATACAGAAGCCAGGCAAAAAGCTG
TCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGAAGCAGCAATCCTGGAGAGT
CATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATGACAGTACGAGCCATAGTGACCACCAA
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>HMBOX1|79618|protein
MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDKFGRRSSYGGSSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSY
DTSPQPCTTNQNGRENNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQG
SDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKL
SDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
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MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDKFGRRSSYGGSSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSY
DTSPQPCTTNQNGRENNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQG
SDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKL
SDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGGHSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
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Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 0 (0) | 1 (2) | 0 (0) | 0 (0) | 1 (1) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 3 (3) |
Syndromic Autism Gene TopGenome-Wide Association Studies(By Ethnic Group) TopCNV Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Papanikolaou, 2006 | - | FISH |  | | autism | - | - | - | - | 1 | - | 1 |
| Berkel, 2010 | Canada | SNP microarray | | | ASD | - | - | - | - | 396 | 5023 | 5419 |
Linkage Studies Top