Evidence Details for SPATA16
Basic Information Top
| Gene Symbol: | SPATA16 ( NYD-SP12 ) |
|---|---|
| Gene Full Name: | spermatogenesis associated 16 |
| Band: | 3q26.31 |
| Quick Links | Entrez ID:83893; OMIM: 609856; Uniprot ID:SPT16_HUMAN; ENSEMBL ID: ENSG00000144962; HGNC ID: 29935 |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>SPATA16|83893|nucleotide
ATGGATGCAGGAAGCAGTAGGAGTTTGGAGAATGCAGTGAATAGGATCTATCATGATCAGCTTGTTCCAAAGATAAACACAAGCAAGAAAATGTCCACCTTAGCG
CACCCACCTAACATCCTGGAAATGTCACAAGAGATTAAGAAAAACTGTGGAGGTAAACAGGTAGAAATCACACTTGAAAGAACAAAAATGACAAAGGGCATCAAA
GAAAAACAAAGCAATGATTTAGAGAAAGCAGCCTTTAAACGGAAGGCAGAAGGTGAAGAAAAGCCAACTAGAAAGAAACAGGCAAAGATAACAGAACTTGACAAT
CAGTTAATCACCATGCCTCTGCCTCACATCCCCTTAAAGAACATAATGGATGTGGAAATGAAGTTGGTCTACATTGATGAAATGGGTGTTCGCTATGAGTTTGTA
GAGTCCTTCATGTCTACTGGGAGTCAGCCAACATGCCAAGCTGCTGAAATAGTAGACCCTTTGAGTGTACATAATTTCAGCTTTCTGCCTCAGATTGACAAATGG
CTTCAGGTAGCCTTAAAGGATGCCAGCTCTTGCTATAGACAAAAGAAATACGCCTTGGCAGCAGGACAGTTCAGAACAGCACTTGAGCTTTGCAGCAAAGGAGCA
GTTCTGGGAGAACCATTTGATGCACCTGCTGAAGATATAGCAAGCGTGGCAAGTTTCATTGAGACAAAGCTTGTTACCTGTTATCTACGGATGAGGAAACCAGAT
CTTGCCCTGAATCATGCACACAGGAGCATTGTTTTAAACCCAGCCTATTTCCGGAATCATCTTCGTCAAGCAACAGTGTTTAGATGTCTGGAGAGGTATTCAGAG
GCTGCCCGGAGTGCCATGATTGCTGACTACATGTTCTGGCTTGGTGGAGGAAGGGAAGAGAGCATAAGCAAGCTCATCAAACTGTATTGGCAGGCCATGATTGAG
GAAGCCATCACCAGAGCTGAATCTTTCTCGGTTATGTACACACCATTTGCGACAAAAATAAGAGCTGATAAAATAGAAAAAGTAAAAGATGCTTTCACAAAAACT
CATCCTGCATATGCAGAGTATATGTACACAGATCTTCAAGCACTCCACATGTTGCCTCAGACAGTTGACTGGTCATCTTTTCCTCCCCAACAATATCTCTTGACT
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ATGGATGCAGGAAGCAGTAGGAGTTTGGAGAATGCAGTGAATAGGATCTATCATGATCAGCTTGTTCCAAAGATAAACACAAGCAAGAAAATGTCCACCTTAGCG
CACCCACCTAACATCCTGGAAATGTCACAAGAGATTAAGAAAAACTGTGGAGGTAAACAGGTAGAAATCACACTTGAAAGAACAAAAATGACAAAGGGCATCAAA
GAAAAACAAAGCAATGATTTAGAGAAAGCAGCCTTTAAACGGAAGGCAGAAGGTGAAGAAAAGCCAACTAGAAAGAAACAGGCAAAGATAACAGAACTTGACAAT
CAGTTAATCACCATGCCTCTGCCTCACATCCCCTTAAAGAACATAATGGATGTGGAAATGAAGTTGGTCTACATTGATGAAATGGGTGTTCGCTATGAGTTTGTA
GAGTCCTTCATGTCTACTGGGAGTCAGCCAACATGCCAAGCTGCTGAAATAGTAGACCCTTTGAGTGTACATAATTTCAGCTTTCTGCCTCAGATTGACAAATGG
CTTCAGGTAGCCTTAAAGGATGCCAGCTCTTGCTATAGACAAAAGAAATACGCCTTGGCAGCAGGACAGTTCAGAACAGCACTTGAGCTTTGCAGCAAAGGAGCA
GTTCTGGGAGAACCATTTGATGCACCTGCTGAAGATATAGCAAGCGTGGCAAGTTTCATTGAGACAAAGCTTGTTACCTGTTATCTACGGATGAGGAAACCAGAT
CTTGCCCTGAATCATGCACACAGGAGCATTGTTTTAAACCCAGCCTATTTCCGGAATCATCTTCGTCAAGCAACAGTGTTTAGATGTCTGGAGAGGTATTCAGAG
GCTGCCCGGAGTGCCATGATTGCTGACTACATGTTCTGGCTTGGTGGAGGAAGGGAAGAGAGCATAAGCAAGCTCATCAAACTGTATTGGCAGGCCATGATTGAG
GAAGCCATCACCAGAGCTGAATCTTTCTCGGTTATGTACACACCATTTGCGACAAAAATAAGAGCTGATAAAATAGAAAAAGTAAAAGATGCTTTCACAAAAACT
CATCCTGCATATGCAGAGTATATGTACACAGATCTTCAAGCACTCCACATGTTGCCTCAGACAGTTGACTGGTCATCTTTTCCTCCCCAACAATATCTCTTGACT
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>SPATA16|83893|protein
MDAGSSRSLENAVNRIYHDQLVPKINTSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITLERTKMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITELDN
QLITMPLPHIPLKNIMDVEMKLVYIDEMGVRYEFVESFMSTGSQPTCQAAEIVDPLSVHNFSFLPQIDKWLQVALKDASSCYRQKKYALAAGQFRTALELCSKGA
VLGEPFDAPAEDIASVASFIETKLVTCYLRMRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEAARSAMIADYMFWLGGGREESISKLIKLYWQAMIE
EAITRAESFSVMYTPFATKIRADKIEKVKDAFTKTHPAYAEYMYTDLQALHMLPQTVDWSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTRE
DTVRQMETMGKRILPILDFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQEAELLQSLMADAMDTLEGRRNNNERVWN
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MDAGSSRSLENAVNRIYHDQLVPKINTSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITLERTKMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITELDN
QLITMPLPHIPLKNIMDVEMKLVYIDEMGVRYEFVESFMSTGSQPTCQAAEIVDPLSVHNFSFLPQIDKWLQVALKDASSCYRQKKYALAAGQFRTALELCSKGA
VLGEPFDAPAEDIASVASFIETKLVTCYLRMRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEAARSAMIADYMFWLGGGREESISKLIKLYWQAMIE
EAITRAESFSVMYTPFATKIRADKIEKVKDAFTKTHPAYAEYMYTDLQALHMLPQTVDWSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTRE
DTVRQMETMGKRILPILDFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQEAELLQSLMADAMDTLEGRRNNNERVWN
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Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 1 (2) | 0 (0) | 1 (1) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 6 (3) |
Syndromic Autism Gene TopGenome-Wide Association Studies (By Ethnic Group) Top Family Based Association Studies: 2
| Reference | Stage | Platform | #Families | Affecteds | Result | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ (range) |
||||||
| CAUCASIAN | |||||||||||
| Ma, 2009_1 | Discovery | Illumina's Human 1M v1 Beadchip | 438 | - (-) |  |  | ASD | - - |
- - | ||
| Hussman, 2011_1 | Discovery | Illumina Infinium Human 1 M beadship | 597 | - (-) | | | ASD | - - |
- - | ||
Case Control Based Association Studies: 0
| Reference | Stage | Platform | ASD Cases | Normal Controls | Result | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ | #Subjects (% Women) |
Age (range) |
|||||
| No Evidence. | ||||||||||||
CNV Studies TopLinkage Studies Top