AutismKB 2.0

Evidence Details for ZGPAT


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Basic Information Top
Gene Symbol:ZGPAT ( GPATC6,GPATCH6,KIAA1847,MGC44880,ZC3H9,ZC3HDC9,ZIP )
Gene Full Name: zinc finger, CCCH-type with G patch domain
Band: 20q13.33
Quick LinksEntrez ID:84619; OMIM: NA; Uniprot ID:ZGPAT_HUMAN; ENSEMBL ID: ENSG00000197114; HGNC ID: 15948
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>ZGPAT|84619|nucleotide
ATGGACGAGGAGAGCCTGGAGTCGGCCTTGCAGACCTACCGTGCGCAGCTGCAGCAGGTGGAGCTGGCCTTGGGCGCCGGCCTGGATTCGTCTGAGCAGGCTGAC
CTGCGCCAGCTGCAGGGGGACCTGAAGGAGCTCATCGAGCTCACCGAGGCCAGCCTGGTGTCTGTCAGGAAGAGCAGCTTGTTGGCCGCGCTGGACGAAGAGCGC
CCGGGCCGCCAGGAAGATGCTGAGTACCAGGCTTTCCGGGAGGCCATCACTGAGGCGGTGGAGGCACCAGCAGCGGCCCGTGGGTCCGGATCAGAGACCGTTCCT
AAAGCAGAGGCGGGGCCAGAATCTGCGGCAGGTGGGCAGGAGGAGGAAGAGGGAGAGGACGAGGAAGAGCTGAGTGGGACAAAGGTGAGCGCGCCCTACTACAGC
TCCTGGGGCACTCTGGAGTATCACAACGCCATGGTGGTGGGAACGGAAGAGGCGGAGGATGGCTCGGCGGGTGTCCGTGTGCTTTACCTGTACCCCACTCACAAG
TCTCTGAAGCCGTGCCCGTTCTTCCTGGAGGGAAAGTGCCGCTTTAAGGAGAACTGCAGGTTCTCCCATGGGCAGGTGGTCTCTCTGGATGAGCTGCGCCCCTTC
CAGGACCCAGACCTGAGCTCCCTGCAGGCCGGCTCTGCGTGTCTGGCCAAGCACCAGGATGGCCTCTGGCACGCAGCACGCATCACCGATGTGGACAACGGCTAC
TACACAGTCAAGTTTGACTCGCTGCTGCTGAGGGAGGCCGTGGTGGAGGGGGACGGCATCCTGCCCCCACTGCGCACAGAGGCCACAGAGTCCGACTCAGACAGC
GACGGTACGGGTGACTCCAGCTATGCCAGAGTGGTGGGGTCAGATGCTGTGGACTCTGGGACCTGCAGCTCTGCCTTTGCTGGCTGGGAGGTGCACACGCGAGGT
ATAGGCTCCAGACTCCTCACCAAGATGGGCTATGAGTTTGGCAAGGGTTTGGGCCGACACGCGGAAGGCCGGGTGGAGCCCATCCATGCTGTGGTGTTGCCTCGA
GGGAAGTCGCTGGACCAGTGTGTGGAGACCCTGCAGAAGCAGACCAGGGTTGGCAAGGCTGGCACCAACAAGCCCCCCAGGTGCCGGGGAAGAGGGGCCAGGCCT
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>ZGPAT|84619|protein
MDEESLESALQTYRAQLQQVELALGAGLDSSEQADLRQLQGDLKELIELTEASLVSVRKSSLLAALDEERPGRQEDAEYQAFREAITEAVEAPAAARGSGSETVP
KAEAGPESAAGGQEEEEGEDEEELSGTKVSAPYYSSWGTLEYHNAMVVGTEEAEDGSAGVRVLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQVVSLDELRPF
QDPDLSSLQAGSACLAKHQDGLWHAARITDVDNGYYTVKFDSLLLREAVVEGDGILPPLRTEATESDSDSDGTGDSSYARVVGSDAVDSGTCSSAFAGWEVHTRG
IGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQCVETLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPRNVFDFLNEKLQGQAPGALEAGAAPAGRR
SKDMYHASKSAKRALSLRLFQTEEKIERTQRDIRSIQEALARNAGRHSVASAQLQEKLAGAQRQLGQLRAQEAGLQQEQRKADTHKKMTEF
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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (0) 1 (3) 0 (0) 0 (0) 0 (0) 1 (1) 0 (0) 0 (0) 0 (0) 12 (4)
Syndromic Autism Gene Top
Genome-Wide Association Studies(By Ethnic Group) Top
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Marshall, 2008 - SNP microarrayASD 427 238 189 - 427 500 927
Berkel, 2010 Canada SNP microarrayASD - - - - 396 5023 5419
Sanders, 2011 Simons Simplex Collection SNP microarray--ASD 1127 1127 - - - - -
Linkage Studies Top