AutismKB 2.0

Evidence Details for SNX29


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Basic Information Top
Gene Symbol:SNX29 ( A-388D4.1,FLJ00143 )
Gene Full Name: sorting nexin 29
Band: 16p13.13-p13.12
Quick LinksEntrez ID:92017; OMIM: NA; Uniprot ID:SNX29_HUMAN; ENSEMBL ID: ENSG00000048471; HGNC ID: 30542
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>SNX29|92017|nucleotide
ATGCACAGCTGGGCTCCGCTGAAGGTGCTGCACAATGACTCCGACATCCTCTTCCCTGTCAGTGGCGTGGGCTCCTACAGCCCAGCAGATGCCCCCCTCGGAAGC
CTGGAGAACGGGACAGGACCAGAGGACCACGTTCTCCCAGATCCTGGACTTCGGTACAGTGTGGAAGCCAGCTCTCCAGGCCACGGAAGTCCTCTGAGCAGCCTG
TTACCTTCTGCCTCAGTGCCAGAGTCCATGACAATTAGTGAACTGCGCCAGGCCACTGTGGCCATGATGAACAGGAAGGATGAGCTGGAGGAGGAGAACAGATCA
CTGCGAAACCTGCTCGACGGTGAGATGGAGCACTCAGCCGCGCTCCGGCAAGAGGTGGACACCTTGAAAAGGAAGGTGGCTGAACAGGAGGAGCGGCAGGGCATG
AAGGTCCAGGCGCTGGCCAGAGAGAACGAGGTGCTCAAAGTCCAACTGAAGAAATATGTAGGAGCTGTCCAGATGCTGAAAAGAGAAGGTCAAACAGCTGAAGTG
CCAAATCTTTGGAGTGTTGATGGAGAAGTTACAGTAGCTGAACAGAAGCCGGGAGAAATTGCTGAAGAACTCGCAAGCTCCTACGAAAGAAAGCTCATCGAGGTG
GCAGAGATGCATGGCGAGCTGATTGAGTTCAACGAGCGCCTGCACAGGGCCCTGGTAGCCAAGGAAGCCCTCGTGTCCCAGATGAGGCAGGAGCTCATCGATCTC
CGGGGACCGGTGCCTGGAGATTTGAGTCAAACGTCCGAAGACCAGAGTTTGTCGGATTTTGAAATATCAAACCGGGCGCTGATCAACGTCTGGATCCCCTCAGTG
TTTCTCCGGGGCAAAGCAGCAAATGCATTCCACGTGTATCAGGTCTACATCCGGATAAAAGACGATGAATGGAATATTTATCGCCGGTATACAGAGTTCAGGAGT
TTGCACCACAAGTTACAAAACAAGTACCCTCAAGTGAGGGCCTACAACTTCCCACCCAAAAAGGCCATTGGAAACAAGGATGCCAAGTTTGTGGAGGAACGGAGA
AAGCAGCTCCAGAATTACCTGCGCAGCGTCATGAACAAAGTCATCCAGATGGTCCCCGAGTTCGCTGCCAGCCCCAAGAAGGAGACCCTCATCCAGCTGATGCCC
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>SNX29|92017|protein
MHSWAPLKVLHNDSDILFPVSGVGSYSPADAPLGSLENGTGPEDHVLPDPGLRYSVEASSPGHGSPLSSLLPSASVPESMTISELRQATVAMMNRKDELEEENRS
LRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQALARENEVLKVQLKKYVGAVQMLKREGQTAEVPNLWSVDGEVTVAEQKPGEIAEELASSYERKLIEV
AEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDFEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRS
LHHKLQNKYPQVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMPFFVDITPPGEPVNSRPKAASRFPKLSRGQPRETRN
VEPQSGDL
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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (0) 0 (1) 2 (6) 0 (0) 0 (0) 0 (1) 0 (0) 0 (0) 0 (0) 4 (8)
Syndromic Autism Gene Top
Genome-Wide Association Studies(By Ethnic Group) Top
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Pinto, 2010 - SNP microarray, qPCRASD - - - - 996 1287 2283
Linkage Studies Top