Evidence Details for DLGAP2
Basic Information Top
Gene Symbol: | DLGAP2 ( DAP2,SAPAP2 ) |
---|---|
Gene Full Name: | discs, large (Drosophila) homolog-associated protein 2 |
Band: | 8p23.3 |
Quick Links | Entrez ID:9228; OMIM: 605438; Uniprot ID:DLGP2_HUMAN; ENSEMBL ID: ENSG00000198010; HGNC ID: 2906 |
Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top
>DLGAP2|9228|nucleotide
ATGAAGGGCCTTTCCGGAAGTCGGACCCAGCCGCCGCTGTGTTCCGGGCACACGTGTGGTCTGGCGCCCCCGGAGGACTGCGAGCACCTGCACCACGGGCCCGAC
GCGCGGCCGCCCTACCTGCTGAGCCCCGCCGACAGCTGCCCCGGGGGGCGCCACCGCTGCTCGCCGCGCAGCTCGGTGCACTCGGAGTGCGTGATGATGCCGGTG
GTGCTGGGCGACCACGTGTCCAGCAGCACCTTCCCGCGGATGCACTACAGCTCGCACTACGACACGCGCGACGACTGCGCTGTGGCCCACGCGGGCGCCAAGATC
AACCGCATCCCGGCCAACCTGCTGGACCAGTTCGAGAAGCAGCTGCCGCTGCACCGGGACGGCTTCCACACGCTGCAGTACCAGAGGACGTCCGCGGCCGCCGAG
CAGCGCAGCGAGAGCCCCGGGCGGATCCGCCACCTGGTACACTCCGTGCAGAAGCTCTTCACCAAGTCGCACTCGCTGGAGGGCTCCTCCAAAAGCAACGCCAAC
GGCACCAAGGCGGACGGCCGGGCGGACGACCACCACCACGCCCACCACGCCAAGCACAGCAAGAGGAGCAAGAGCAAGGAGCGCAAGCCGGAGGGCAAGCCCCGG
CCCGGCATGAGCAGCTGGTGGAGCTCGGACGACAACCTGGACAGCGACAGCACCTATCGGACGCCCAGCGTGCTCAACCGGCACCACCTGGGCCCCGTGGCCCAC
TGCTACCCCGACGCGCTGCAGAGCCCCTTCGGGGACCTGTCCCTCAAGACCTCCAAGAGCAACAACGACGTCAAGTGCTCGGCCTGTGAGGGGTTGGCGCTGACG
CCCGACGCCAAGTACCTGAAGCGCAGCTCCTGGTCTACGCTGACGGTCAGCCAGGCCAAGGAGGCCTACCGCAAGAGCTCGCTGAACCTGGACAAGCCGCTGCTG
CACCAGGACGCCAAGCCCGCCCTGAGGCCGTGCCACTACCTCCAGGTACCTCAGGATGAGTGGGGAGGGTACCCCACCGGTGGCAAAGATGAGGAGATTCCCTGC
AGGAGAATGAGAAGTGGGAGTTACATTAAAGCCATGGGGGACGAGGAGAGCGGAGAGTCAGACTCCAGCCCCAAGACATCACCAAAGTCGGCAATCCTACCAGAG
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ATGAAGGGCCTTTCCGGAAGTCGGACCCAGCCGCCGCTGTGTTCCGGGCACACGTGTGGTCTGGCGCCCCCGGAGGACTGCGAGCACCTGCACCACGGGCCCGAC
GCGCGGCCGCCCTACCTGCTGAGCCCCGCCGACAGCTGCCCCGGGGGGCGCCACCGCTGCTCGCCGCGCAGCTCGGTGCACTCGGAGTGCGTGATGATGCCGGTG
GTGCTGGGCGACCACGTGTCCAGCAGCACCTTCCCGCGGATGCACTACAGCTCGCACTACGACACGCGCGACGACTGCGCTGTGGCCCACGCGGGCGCCAAGATC
AACCGCATCCCGGCCAACCTGCTGGACCAGTTCGAGAAGCAGCTGCCGCTGCACCGGGACGGCTTCCACACGCTGCAGTACCAGAGGACGTCCGCGGCCGCCGAG
CAGCGCAGCGAGAGCCCCGGGCGGATCCGCCACCTGGTACACTCCGTGCAGAAGCTCTTCACCAAGTCGCACTCGCTGGAGGGCTCCTCCAAAAGCAACGCCAAC
GGCACCAAGGCGGACGGCCGGGCGGACGACCACCACCACGCCCACCACGCCAAGCACAGCAAGAGGAGCAAGAGCAAGGAGCGCAAGCCGGAGGGCAAGCCCCGG
CCCGGCATGAGCAGCTGGTGGAGCTCGGACGACAACCTGGACAGCGACAGCACCTATCGGACGCCCAGCGTGCTCAACCGGCACCACCTGGGCCCCGTGGCCCAC
TGCTACCCCGACGCGCTGCAGAGCCCCTTCGGGGACCTGTCCCTCAAGACCTCCAAGAGCAACAACGACGTCAAGTGCTCGGCCTGTGAGGGGTTGGCGCTGACG
CCCGACGCCAAGTACCTGAAGCGCAGCTCCTGGTCTACGCTGACGGTCAGCCAGGCCAAGGAGGCCTACCGCAAGAGCTCGCTGAACCTGGACAAGCCGCTGCTG
CACCAGGACGCCAAGCCCGCCCTGAGGCCGTGCCACTACCTCCAGGTACCTCAGGATGAGTGGGGAGGGTACCCCACCGGTGGCAAAGATGAGGAGATTCCCTGC
AGGAGAATGAGAAGTGGGAGTTACATTAAAGCCATGGGGGACGAGGAGAGCGGAGAGTCAGACTCCAGCCCCAAGACATCACCAAAGTCGGCAATCCTACCAGAG
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>DLGAP2|9228|protein
MKGLSGSRTQPPLCSGHTCGLAPPEDCEHLHHGPDARPPYLLSPADSCPGGRHRCSPRSSVHSECVMMPVVLGDHVSSSTFPRMHYSSHYDTRDDCAVAHAGAKI
NRIPANLLDQFEKQLPLHRDGFHTLQYQRTSAAAEQRSESPGRIRHLVHSVQKLFTKSHSLEGSSKSNANGTKADGRADDHHHAHHAKHSKRSKSKERKPEGKPR
PGMSSWWSSDDNLDSDSTYRTPSVLNRHHLGPVAHCYPDALQSPFGDLSLKTSKSNNDVKCSACEGLALTPDAKYLKRSSWSTLTVSQAKEAYRKSSLNLDKPLL
HQDAKPALRPCHYLQVPQDEWGGYPTGGKDEEIPCRRMRSGSYIKAMGDEESGESDSSPKTSPKSAILPEPLLKSIGQRPLGEHQTQTYLQAASDVPVGHSLDPA
ANYNSPKFRSRNQSYMRAVSTLSQASCVSQVSEAEINGQFESVCESVFSEVESQAMDALDLPGCFRTRSHSYLRAIQAGYSQDDECIPMMTPSDITSTIRSTAAV
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MKGLSGSRTQPPLCSGHTCGLAPPEDCEHLHHGPDARPPYLLSPADSCPGGRHRCSPRSSVHSECVMMPVVLGDHVSSSTFPRMHYSSHYDTRDDCAVAHAGAKI
NRIPANLLDQFEKQLPLHRDGFHTLQYQRTSAAAEQRSESPGRIRHLVHSVQKLFTKSHSLEGSSKSNANGTKADGRADDHHHAHHAKHSKRSKSKERKPEGKPR
PGMSSWWSSDDNLDSDSTYRTPSVLNRHHLGPVAHCYPDALQSPFGDLSLKTSKSNNDVKCSACEGLALTPDAKYLKRSSWSTLTVSQAKEAYRKSSLNLDKPLL
HQDAKPALRPCHYLQVPQDEWGGYPTGGKDEEIPCRRMRSGSYIKAMGDEESGESDSSPKTSPKSAILPEPLLKSIGQRPLGEHQTQTYLQAASDVPVGHSLDPA
ANYNSPKFRSRNQSYMRAVSTLSQASCVSQVSEAEINGQFESVCESVFSEVESQAMDALDLPGCFRTRSHSYLRAIQAGYSQDDECIPMMTPSDITSTIRSTAAV
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Evidence summary Top
Click the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
---|---|---|---|---|---|---|---|---|---|---|---|
Score (No. of Studies) | No | 0 (1) | 2 (8) | 0 (0) | 0 (0) | 0 (0) | 0 (1) | 0 (0) | 0 (1) | 0 (0) | 4 (11) |
Syndromic Autism Gene Top
Genome-Wide Association Studies (By Ethnic Group) Top
Family Based Association Studies: 1
Reference | Stage | Platform | #Families | Affecteds | Result | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
#Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ (range) |
||||||
CAUCASIAN | |||||||||||
Hussman, 2011_1 | Discovery | Illumina Infinium Human 1 M beadship | 597 | - (-) | ASD | - - |
- - |
Case Control Based Association Studies: 0
Reference | Stage | Platform | ASD Cases | Normal Controls | Result | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
#Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ | #Subjects (% Women) |
Age (range) |
|||||
No Evidence. |
CNV Studies Top
Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
Wassink, 2001 | USA | Chromosomal analysis of G-band | autism | - | - | - | - | 278 | - | 278 | ||
Yu, 2002 | USA | STS mapping | PDD | 105 | - | 105 | - | - | 668 | 668 | ||
Papanikolaou, 2006 | - | FISH | autism | - | - | - | - | 1 | - | 1 | ||
Szatmari, 2007 | Europe, North America | SNP microarray | ASD | 1491 | - | - | - | - | - | 0 | ||
Marshall, 2008 | - | SNP microarray | ASD | 427 | 238 | 189 | - | 427 | 500 | 927 | ||
Pinto, 2010 | - | SNP microarray, qPCR | ASD | - | - | - | - | 996 | 1287 | 2283 | ||
Sanders, 2011 | Simons Simplex Collection | SNP microarray | - | - | ASD | 1127 | 1127 | - | - | - | - | - |
Alvarez-Mora MI, 2016 | - | Microarray | ASD | - | - | - | - | 44 | - | - |
Linkage Studies Top
Low Scale Association Studies (by Ethnic Group) Top
Large Scale Expression Studies Top
NGS de novo Mutation Studies Top
Reference | Case Number | Family Number | de novo Number | Title |
---|---|---|---|---|
De Rubeis S, 2014 | 2270 | - | 1702 | Synaptic, transcriptional and chromatin genes disrupted in autism |
NGS Mosaic SNV Studies Top
NGS Other Studies Top
Reference | Source | Platform | ADI-R | ADOS | Diagnosis | Family | Affected | Validation Method | ||
---|---|---|---|---|---|---|---|---|---|---|
Total | Simplex | Multiplex | ||||||||
Cukier HN, 2014 | - | Illumina HiSeq 2000 | ASD | 40 | - | - | 100 | HumanExome BeadChip or Sanger sequencing |
Low Scale Gene Studies Top
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