AutismKB 2.0

Evidence Details for CHST2


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Basic Information Top
Gene Symbol:CHST2 ( C6ST,GST-2,GST2,Gn6ST-1 )
Gene Full Name: carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
Band: 3q24
Quick LinksEntrez ID:9435; OMIM: 603798; Uniprot ID:CHST2_HUMAN; ENSEMBL ID: ENSG00000175040; HGNC ID: 1970
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>CHST2|9435|nucleotide
ATGAGCCGCAGCCCGCAGCGAGCTCTGCCCCCGGGCGCGCTCCCTCGGCTGCTCCAGGCTGCGCCTGCAGCCGCGCCGCGTGCCCTGCTCCCGCAGTGGCCCCGG
CGCCCAGGACGCCGCTGGCCCGCGTCCCCTCTCGGAATGAAGGTGTTCCGTAGGAAGGCGCTGGTGTTGTGCGCGGGCTATGCACTGCTGCTGGTGCTCACTATG
CTCAACCTCCTGGACTACAAGTGGCACAAGGAGCCGCTGCAGCAGTGCAACCCCGATGGGCCGCTGGGTGCCGCAGCGGGGGCAGCCGGAGGCAGCTGGGGGCGC
CCAGGGCCGCCTCCGGCCGGGCCGCCCCGTGCTCATGCCCGTTTGGACCTCCGCACTCCTTACCGCCCTCCCGCTGCCGCCGTCGGGGCGGCTCCTGCAGCCGCG
GCAGGGATGGCGGGGGTTGCGGCCCCTCCAGGCAATGGCACTCGGGGCACCGGGGGCGTCGGGGACAAGCGGCAGCTGGTGTACGTGTTCACCACGTGGCGCTCT
GGCTCGTCGTTCTTCGGCGAGCTATTCAACCAGAATCCCGAGGTGTTCTTTCTCTACGAGCCAGTGTGGCATGTATGGCAAAAACTGTATCCGGGGGACGCCGTT
TCCCTGCAGGGGGCAGCGCGGGACATGCTGAGCGCTCTTTACCGCTGCGACCTCTCTGTCTTCCAGTTGTATAGCCCCGCGGGCAGCGGGGGGCGCAACCTCACC
ACGCTGGGCATCTTCGGCGCAGCCACCAACAAGGTGGTGTGCTCGTCACCACTCTGCCCCGCCTACCGCAAGGAGGTCGTGGGGTTGGTGGACGACCGCGTGTGC
AAGAAGTGCCCGCCACAGCGCCTGGCGCGTTTCGAGGAGGAGTGCCGCAAGTACCGCACACTAGTCATAAAGGGTGTGCGCGTCTTCGACGTGGCGGTCTTGGCG
CCACTGCTGCGAGACCCGGCCCTGGACCTCAAGGTCATCCACTTGGTGCGTGATCCCCGCGCGGTGGCGAGTTCACGGATCCGCTCGCGCCACGGCCTCATCCGT
GAGAGCCTACAGGTGGTGCGCAGCCGAGACCCGCGAGCTCACCGCATGCCCTTCTTGGAGGCCGCGGGCCACAAGCTTGGCGCCAAGAAGGAGGGCGTGGGCGGC
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>CHST2|9435|protein
MSRSPQRALPPGALPRLLQAAPAAAPRALLPQWPRRPGRRWPASPLGMKVFRRKALVLCAGYALLLVLTMLNLLDYKWHKEPLQQCNPDGPLGAAAGAAGGSWGR
PGPPPAGPPRAHARLDLRTPYRPPAAAVGAAPAAAAGMAGVAAPPGNGTRGTGGVGDKRQLVYVFTTWRSGSSFFGELFNQNPEVFFLYEPVWHVWQKLYPGDAV
SLQGAARDMLSALYRCDLSVFQLYSPAGSGGRNLTTLGIFGAATNKVVCSSPLCPAYRKEVVGLVDDRVCKKCPPQRLARFEEECRKYRTLVIKGVRVFDVAVLA
PLLRDPALDLKVIHLVRDPRAVASSRIRSRHGLIRESLQVVRSRDPRAHRMPFLEAAGHKLGAKKEGVGGPADYHALGAMEVICNSMAKTLQTALQPPDWLQGHY
LVVRYEDLVGDPVKTLRRVYDFVGLLVSPEMEQFALNMTSGSGSSSKPFVVSARNATQAANAWRTALTFQQIKQVEEFCYQPMAVLGYERVNSPEEVKDLSKTLL
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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (0) 1 (1) 0 (0) 0 (0) 0 (0) 1 (1) 0 (0) 0 (0) 0 (0) 12 (2)
Syndromic Autism Gene Top
Genome-Wide Association Studies(By Ethnic Group) Top
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Zwaag, 2009 - SNP microarrayautism - - - - 105 267 372
Linkage Studies Top