AutismKB 2.0

Genome-Wide Association Study(GWAS) Related Gene List


This dataset contains 212 genes. We collected all the genome-wide association studies in the dataset, including both family-based studies and case-control based studies.
According to the number of positive studies and P value, genes in the dataset are scored by 3, 2, 1. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Family-base Studies Case-control based Studies GWAS Score
Positive Negative P<1e-7 Positive Negative P<1e-7
AutG2260 FGFR1 8p11.23 0 0 0 1 0 1 1
AutG23224 SYNE2 14q23.2 1 0 0 0 0 0 1
AutG151531 UPP2 2q24.1 1 2 1 0 0 0 1
AutG23105 FSTL4 5q31.1 0 1 0 1 0 1 1
AutG147 ADRA1B 5q33.3 0 0 0 1 1 0 1
AutG55359 STYK1 12p13.2 0 0 0 1 0 1 1
AutG10237 SLC35B1 17q21.33 1 0 0 0 0 0 1
AutG116135 LRRC3B 3p24.1 1 0 1 0 0 0 1
AutG102466746 MIR6780B 6p21.1 0 0 0 1 0 1 1
AutG137994 LETM2 8p11.23 0 0 0 1 0 1 1
AutG2894 GRID1 10q23.1-q23.2 1 0 1 0 0 0 1
AutG5799 PTPRN2 7q36.3 1 1 0 0 0 0 1
AutG9839 ZEB2 2q22.3 0 1 0 1 0 0 1
AutG9013 TAF1C 16q24 1 2 0 0 0 0 1
AutG80854 SETD7 4q31.1 1 0 0 0 0 0 1
AutG9962 SLC23A2 20p13 1 0 0 0 0 0 1
AutG1630 DCC 18q21.2 1 0 0 0 0 0 1
AutG1591 CYP24A1 20q13.2 0 0 0 1 0 0 1
AutG55356 SLC22A15 1p13.1 1 0 0 0 0 0 1
AutG27257 LSM1 8p11.23 0 0 0 1 0 1 1
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Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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