AutismKB 2.0

Genome-Wide Association Study(GWAS) Related Gene List


This dataset contains 212 genes. We collected all the genome-wide association studies in the dataset, including both family-based studies and case-control based studies.
According to the number of positive studies and P value, genes in the dataset are scored by 3, 2, 1. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Family-base Studies Case-control based Studies GWAS Score
Positive Negative P<1e-7 Positive Negative P<1e-7
AutG55689 YEATS2 3q27.1 2 0 0 0 0 0 2
AutG83943 IMMP2L 7q31.1 0 2 0 2 0 0 2
AutG64405 CDH22 20q13.12 1 0 0 1 0 0 2
AutG51760 SYT17 16p12.3 1 0 0 1 0 0 2
AutG92737 DNER 2q36.3 2 0 0 0 0 0 2
AutG22846 VASH1 14q24.3 1 0 0 1 0 0 2
AutG5613 PRKX Xp22.33 1 0 0 1 0 0 2
AutG3720 JARID2 6p22.3 2 2 0 0 0 0 2
AutG222537 HS3ST5 6q21-q22.1 1 0 0 1 0 0 2
AutG158800 RHOXF1 Xq24 1 0 0 1 0 0 2
AutG2444 FRK 6q22.1 1 1 0 1 0 0 2
AutG84445 LZTS2 10q24.31 1 0 0 1 0 0 2
AutG254170 FBXO33 14q21.1 1 1 0 1 0 0 2
AutG23026 MYO16 13q33.3 1 1 0 1 0 0 2
AutG2066 ERBB4 2q34 2 1 0 0 0 0 2
AutG55227 LRRC1 6p12.1 1 0 0 1 0 0 2
AutG85358 SHANK3 22q13.33 1 0 1 0 0 0 1
AutG26047 CNTNAP2 7q35-q36.1 1 3 1 0 0 0 1
AutG27086 FOXP1 3p13 0 0 0 1 0 1 1
AutG4233 MET 7q31 0 0 0 1 0 0 1
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Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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