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Notes:
*iFish(Wang M, Wei L, PIMD: 27527004) is a supporting vector machine (SVM) based classifier which uses gene and gene family specific attributes.
iFish utilized customized prediction cutoff for each classifier that maximizes the sum of sensitivity andspecificity.

Gene Symbol	Chr	Position	refNT	altNT	transcript	iFish Probability	iFish Prediction	SIFT	Polyhen2_HDIV	Polyhen2_HVAR
PEG3	19	57325545	G	C	NM_001146185	0.0376	neutral	0	0	0
USP29	19	57641305	T	C	NM_020903	0.3085	neutral	0.39	0.728	0.285
ZNF805	19	57765985	G	A	NM_001145078	0.3198	neutral	0	0	0
ZNF460	19	57803573	T	A	NM_006635	0.0506	neutral	0	0.001	0.001
ZNF304	19	57863052	T	C	NM_001290318	0.0056	neutral	0	0	0
ZNF530	19	58117413	G	A	NM_020880	0.182	neutral	0.02	0.775	0.197
CHMP2A	19	59063080	G	C	NM_014453	0.1403	neutral	0.78	0	0
RFX2	19	6013032	C	T	NM_134433	0.058	neutral	0	0.094	0.108
RFX2	19	6044241	G	A	NM_000635	0.058	neutral	0.66	0.604	0.094
HCN2	19	615843	C	G	NM_001194	0.6528	deleterious	0	1	0.997
PSPN	19	6375788	C	T	NM_004158	0.1967	neutral	0.42	0.429	0.019
FGF22	19	643270	G	A	NM_001300812	0.8926	deleterious	0	0	0
C3	19	6678390	G	C	NM_000064	0.8364	deleterious	0.01	0.997	0.986
ZNF557	19	7083553	C	A	NM_001044388	0.0002	neutral	0	0.138	0.016
PEX11G	19	7553881	C	A	NM_001270539	0.8743	deleterious	0.05	0	0
LRRC8E	19	7964482	G	A	NM_001268285	0.4715	deleterious	0	0	0
FBN3	19	8175770	T	A	NM_032447	0.1729	neutral	0	0.026	0.045
FBN3	19	8183871	G	A	NM_032447	0.1467	neutral	0	0.039	0.005
CD320	19	8367787	T	C	NM_001165895	0.017	neutral	0	0.001	0.002
ANGPTL4	19	8434160	T	G	NM_139314	0.7712	deleterious	0	1	0.995

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Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

AutismKB 2.0

View Variant Prediction

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics