AutismKB 2.0

Linkage Region Related Gene List


We collected all the linkage regions from related studies in the dataset. We deduced genomic regions from the bands, and collected all the genes in the bands.
According to the number of related linkage studies, genes in the dataset are scored 2, 1. Only the genes with two or more related studies are listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #Likage Studies Score
AutG51283 BFAR 16p13.12 bifunctional apoptosis regulator 4 2
AutG503640 ARGFXP2 17q11.2 arginine-fifty homeobox pseudogene 2 6 2
AutG730 C7 5p13.1 complement component 7 4 2
AutG7249 TSC2 16p13.3 tuberous sclerosis 2 2 1
AutG26047 CNTNAP2 7q35-q36.1 contactin associated protein-like 2 3 1
AutG23040 MYT1L 2p25.3 myelin transcription factor 1-like 2 1
AutG5021 OXTR 3p25.3 oxytocin receptor 3 1
AutG6529 SLC6A1 3p25.3 solute carrier family 6 (neurotransmitter transporter, GABA), member 1 3 1
AutG9901 SRGAP3 3p25.3 SLIT-ROBO Rho GTPase activating protein 3 3 1
AutG54806 AHI1 6q23.3 Abelson helper integration site 1 2 1
AutG84231 TRAF7 16p13.3 TNF receptor-associated factor 7 2 1
AutG5587 PRKD1 14q12 protein kinase D1 3 1
AutG5290 PIK3CA 3q26.32 phosphoinositide-3-kinase, catalytic, alpha polypeptide 2 1
AutG7051 TGM1 14q12 transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase) 3 1
AutG23524 SRRM2 16p13.3 serine/arginine repetitive matrix 2 2 1
AutG8912 CACNA1H 16p13.3 calcium channel, voltage-dependent, T type, alpha 1H subunit 2 1
AutG1977 EIF4E 4q23 eukaryotic translation initiation factor 4E 2 1
AutG79718 TBL1XR1 3q26.32 transducin (beta)-like 1 X-linked receptor 1 2 1
AutG64101 LRRC4 7q32.1 leucine rich repeat containing 4 3 1
AutG56243 KIAA1217 10p12.2-p12.1 KIAA1217 2 1
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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018