AutismKB 2.0

Linkage Region Related Gene List


We collected all the linkage regions from related studies in the dataset. We deduced genomic regions from the bands, and collected all the genes in the bands.
According to the number of related linkage studies, genes in the dataset are scored 2, 1. Only the genes with two or more related studies are listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #Likage Studies Score
AutG55209 SETD5 3p25.3 SET domain containing 5 3 1
AutG9797 TATDN2 3p25.3 TatD DNase domain containing 2 3 1
AutG1357 CPA1 7q32.2 carboxypeptidase A1 (pancreatic) 3 1
AutG1387 CREBBP 16p13.3 CREB binding protein 2 1
AutG2290 FOXG1 14q12 forkhead box G1 3 1
AutG84952 CGNL1 15q21.3 cingulin-like 1 2 1
AutG9351 SLC9A3R2 16p13.3 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 2 1
AutG145781 GCOM1 15q21.3 GRINL1A complex locus 2 1
AutG59345 GNB4 3q26.33 guanine nucleotide binding protein (G protein), beta polypeptide 4 2 1
AutG169714 QSOX2 9q34.3 quiescin Q6 sulfhydryl oxidase 2 3 1
AutG3688 ITGB1 10p11.22 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 3 1
AutG54221 SNTG2 2p25.3 syntrophin, gamma 2 2 1
AutG2572 GAD2 10p12.1 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 2 1
AutG54790 TET2 4q24 tet oncogene family member 2 2 1
AutG2318 FLNC 7q32.1 filamin C, gamma 3 1
AutG774 CACNA1B 9q34.3 calcium channel, voltage-dependent, N type, alpha 1B subunit 3 1
AutG2132 EXT2 11p11.2 exostosin 2 2 1
AutG57608 KIAA1462 10p11.23 KIAA1462 2 1
AutG23476 BRD4 19p13.12 bromodomain containing 4 2 1
AutG7023 TFAP4 16p13.3 transcription factor AP-4 (activating enhancer binding protein 4) 2 1
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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018