AutismKB 2.0

Linkage Region Related Gene List


We collected all the linkage regions from related studies in the dataset. We deduced genomic regions from the bands, and collected all the genes in the bands.
According to the number of related linkage studies, genes in the dataset are scored 2, 1. Only the genes with two or more related studies are listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #Likage Studies Score
AutG26086 GPSM1 9q34.3 G-protein signaling modulator 1 3 1
AutG4126 MANBA 4q24 mannosidase, beta A, lysosomal 2 1
AutG8567 MADD 11p11.2 MAP-kinase activating death domain 2 1
AutG79813 EHMT1 9q34.3 euchromatic histone-lysine N-methyltransferase 1 3 1
AutG5795 PTPRJ 11p11.2 protein tyrosine phosphatase, receptor type, J 2 1
AutG9716 AQR 15q14 aquarius homolog (mouse) 3 1
AutG26140 TTLL3 3p25.3 tubulin tyrosine ligase-like family, member 3 3 1
AutG283078 MKX 10p12.1 mohawk homeobox 2 1
AutG23162 MAPK8IP3 16p13.3 mitogen-activated protein kinase 8 interacting protein 3 2 1
AutG4854 NOTCH3 19p13.12 notch 3 2 1
AutG93627 TBCK 4q24 TBC1 domain containing kinase 2 1
AutG51234 TMEM85 15q14 transmembrane protein 85 3 1
AutG84572 GNPTG 16p13.3 N-acetylglucosamine-1-phosphate transferase, gamma subunit 2 1
AutG55709 KBTBD4 11p11.2 kelch repeat and BTB (POZ) domain containing 4 2 1
AutG26751 SH3YL1 2p25.3 SH3 domain containing, Ysc84-like 1 (S. cerevisiae) 2 1
AutG84464 SLX4 16p13.3 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) 2 1
AutG491 ATP2B2 3p25.3 ATPase, Ca++ transporting, plasma membrane 2 3 1
AutG4051 CYP4F3 19p13.12 cytochrome P450, family 4, subfamily F, polypeptide 3 2 1
AutG23534 TNPO3 7q32.1 transportin 3 3 1
AutG197335 WDR90 16p13.3 WD repeat domain 90 2 1
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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018