AutismKB 2.0

Linkage Region Related Gene List


We collected all the linkage regions from related studies in the dataset. We deduced genomic regions from the bands, and collected all the genes in the bands.
According to the number of related linkage studies, genes in the dataset are scored 2, 1. Only the genes with two or more related studies are listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #Likage Studies Score
AutG57582 KCNT1 9q34.3 potassium channel, subfamily T, member 1 3 1
AutG9465 AKAP7 6q23.2 A kinase (PRKA) anchor protein 7 2 1
AutG9712 USP6NL 10p14 USP6 N-terminal like 3 1
AutG8829 NRP1 10p11.22 neuropilin 1 3 1
AutG6713 SQLE 8q24.13 squalene epoxidase 3 1
AutG11067 C10orf10 10q11.21 chromosome 10 open reading frame 10 2 1
AutG6187 RPS2 16p13.3 ribosomal protein S2 2 1
AutG10474 TADA3 3p25.3 transcriptional adaptor 3 3 1
AutG9919 SEC16A 9q34.3 SEC16 homolog A (S. cerevisiae) 3 1
AutG56654 NPDC1 9q34.3 neural proliferation, differentiation and control, 1 3 1
AutG57512 GPR158 10p12.1 G protein-coupled receptor 158 2 1
AutG3698 ITIH2 10p14 inter-alpha (globulin) inhibitor H2 3 1
AutG7862 BRPF1 3p25.3 bromodomain and PHD finger containing, 1 3 1
AutG55684 C9orf86 9q34.3 chromosome 9 open reading frame 86 3 1
AutG79006 METRN 16p13.3 meteorin, glial cell differentiation regulator 2 1
AutG10221 TRIB1 8q24.13 tribbles homolog 1 (Drosophila) 3 1
AutG23274 CLEC16A 16p13.13 C-type lectin domain family 16, member A 3 1
AutG26019 UPF2 10p14 UPF2 regulator of nonsense transcripts homolog (yeast) 3 1
AutG1408 CRY2 11p11.2 cryptochrome 2 (photolyase-like) 2 1
AutG389812 LCN15 9q34.3 lipocalin 15 3 1
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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018