AutismKB 2.0

Linkage Region Related Gene List


We collected all the linkage regions from related studies in the dataset. We deduced genomic regions from the bands, and collected all the genes in the bands.
According to the number of related linkage studies, genes in the dataset are scored 2, 1. Only the genes with two or more related studies are listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #Likage Studies Score
AutG29085 PHPT1 9q34.3 phosphohistidine phosphatase 1 3 1
AutG116028 C16orf75 16p13.13 chromosome 16 open reading frame 75 3 1
AutG27071 DAPP1 4q23 dual adaptor of phosphotyrosine and 3-phosphoinositides 2 1
AutG151835 CPNE9 3p25.3 copine family member IX 3 1
AutG392 ARHGAP1 11p11.2 Rho GTPase activating protein 1 2 1
AutG5530 PPP3CA 4q24 protein phosphatase 3, catalytic subunit, alpha isozyme 2 1
AutG813 CALU 7q32.1 calumenin 3 1
AutG64419 MTMR14 3p25.3 myotubularin related protein 14 3 1
AutG114971 PTPMT1 11p11.2 protein tyrosine phosphatase, mitochondrial 1 2 1
AutG57616 TSHZ3 19q12 teashirt zinc finger homeobox 3 2 1
AutG64718 UNKL 16p13.3 unkempt homolog (Drosophila)-like 2 1
AutG84973 SNHG7 9q34.3 small nucleolar RNA host gene 7 (non-protein coding) 3 1
AutG23430 TPSD1 16p13.3 tryptase delta 1 2 1
AutG115795 C3orf24 3p25.3 chromosome 3 open reading frame 24 3 1
AutG83590 TMUB1 7q36.1 transmembrane and ubiquitin-like domain containing 1 2 1
AutG339044 PKD1P1 16p13.11 polycystic kidney disease 1 (autosomal dominant) pseudogene 1 2 1
AutG9519 TBPL1 6q23.2 TBP-like 1 2 1
AutG5919 RARRES2 7q36.1 retinoic acid receptor responder (tazarotene induced) 2 2 1
AutG7260 TSSC1 2p25.3 tumor suppressing subtransferable candidate 1 2 1
AutG51530 ZC3HC1 7q32.2 zinc finger, C3HC-type containing 1 3 1
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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018