AutismKB 2.0

Linkage Region Related Gene List


We collected all the linkage regions from related studies in the dataset. We deduced genomic regions from the bands, and collected all the genes in the bands.
According to the number of related linkage studies, genes in the dataset are scored 2, 1. Only the genes with two or more related studies are listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #Likage Studies Score
AutG59351 PBOV1 6q23.3 prostate and breast cancer overexpressed 1 2 1
AutG10093 ARPC4 3p25.3 actin related protein 2/3 complex, subunit 4, 20kDa 3 1
AutG6387 CXCL12 10q11.21 chemokine (C-X-C motif) ligand 12 2 1
AutG126536 LOC126536 19p13.12 - 2 1
AutG100133308 LOC100133308 10q11.21 - 2 1
AutG143098 MPP7 10p12.1 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 2 1
AutG254312 LOC254312 10p14 - 3 1
AutG3269 HRH1 3p25.3 histamine receptor H1 3 1
AutG898 CCNE1 19q12 cyclin E1 2 1
AutG221122 LOC221122 11p11.2 - 2 1
AutG10127 ZNF263 16p13.3 zinc finger protein 263 2 1
AutG119180 LYZL2 10p11.23 lysozyme-like 2 2 1
AutG6936 C2orf3 2p11.2-p11.1 chromosome 2 open reading frame 3 2 1
AutG100131726 LOC100131726 8q24.13 - 3 1
AutG221002 RASGEF1A 10q11.21 RasGEF domain family, member 1A 2 1
AutG55039 TRMT12 8q24.13 tRNA methyltransferase 12 homolog (S. cerevisiae) 3 1
AutG57584 ARHGAP21 10p12.1 Rho GTPase activating protein 21 2 1
AutG7186 TRAF2 9q34.3 TNF receptor-associated factor 2 3 1
AutG158160 HSD17B7P2 10p11.1 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2 2 1
AutG114900 C1QTNF4 11p11.2 C1q and tumor necrosis factor related protein 4 2 1
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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018