AutismKB 2.0

Linkage Region Related Gene List


We collected all the linkage regions from related studies in the dataset. We deduced genomic regions from the bands, and collected all the genes in the bands.
According to the number of related linkage studies, genes in the dataset are scored 2, 1. Only the genes with two or more related studies are listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #Likage Studies Score
AutG10062 NR1H3 11p11.2 nuclear receptor subfamily 1, group H, member 3 2 1
AutG56952 PRTFDC1 10p12.1 phosphoribosyl transferase domain containing 1 2 1
AutG10379 IRF9 14q12 interferon regulatory factor 9 3 1
AutG8725 C19orf2 19q12 chromosome 19 open reading frame 2 2 1
AutG100134368 LOC100134368 16p13.3 - 2 1
AutG126 ADH1C 4q23 alcohol dehydrogenase 1C (class I), gamma polypeptide 2 1
AutG219670 ENKUR 10p12.1 enkurin, TRPC channel interacting protein 2 1
AutG66002 CYP4F12 19p13.12 cytochrome P450, family 4, subfamily F, polypeptide 12 2 1
AutG22859 LPHN1 19p13.2 latrophilin 1 2 1
AutG84141 FAM176A 2p12 family with sequence similarity 176, member A 2 1
AutG5068 REG3A 2p12 regenerating islet-derived 3 alpha 2 1
AutG254427 C10orf47 10p14 chromosome 10 open reading frame 47 3 1
AutG285368 PRRT3 3p25.3 proline-rich transmembrane protein 3 3 1
AutG116225 ZMYND19 9q34.3 zinc finger, MYND-type containing 19 3 1
AutG3040 HBA2 16p13.3 hemoglobin, alpha 2 2 1
AutG9745 ZNF536 19q13.11 zinc finger protein 536 2 1
AutG51330 TNFRSF12A 16p13.3 tumor necrosis factor receptor superfamily, member 12A 2 1
AutG6870 TACR3 4q24 tachykinin receptor 3 2 1
AutG55072 RNF31 14q12 ring finger protein 31 3 1
AutG8875 VNN2 6q23.2 vanin 2 2 1
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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018