AutismKB 2.0

Linkage Region Related Gene List


We collected all the linkage regions from related studies in the dataset. We deduced genomic regions from the bands, and collected all the genes in the bands.
According to the number of related linkage studies, genes in the dataset are scored 2, 1. Only the genes with two or more related studies are listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #Likage Studies Score
AutG2321 FLT1 13q12.3 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) 2 1
AutG3614 IMPDH1 7q32.1 IMP (inosine 5'-monophosphate) dehydrogenase 1 3 1
AutG29966 STRN3 14q12 striatin, calmodulin binding protein 3 3 1
AutG594842 HAS2-AS 8q24.13 HAS2 antisense RNA (non-protein coding) 3 1
AutG7329 UBE2I 16p13.3 ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) 2 1
AutG90378 SAMD1 19p13.12 sterile alpha motif domain containing 1 2 1
AutG84985 FAM83A 8q24.13 family with sequence similarity 83, member A 3 1
AutG347730 LRRTM1 2p12 leucine rich repeat transmembrane neuronal 1 2 1
AutG10548 TM9SF1 14q12 transmembrane 9 superfamily member 1 3 1
AutG2041 EPHA1 7q34-q35 EPH receptor A1 2 1
AutG115265 DDIT4L 4q24 DNA-damage-inducible transcript 4-like 2 1
AutG220929 ZNF438 10p11.23 zinc finger protein 438 2 1
AutG51734 SEPX1 16p13.3 selenoprotein X, 1 2 1
AutG83986 ITFG3 16p13.3 integrin alpha FG-GAP repeat containing 3 2 1
AutG1186 CLCN7 16p13.3 chloride channel 7 2 1
AutG26333 OR7A17 19p13.12 olfactory receptor, family 7, subfamily A, member 17 2 1
AutG23590 PDSS1 10p12.1 prenyl (decaprenyl) diphosphate synthase, subunit 1 2 1
AutG146562 C16orf71 16p13.3 chromosome 16 open reading frame 71 2 1
AutG5913 RAPSN 11p11.2 receptor-associated protein of the synapse 2 1
AutG53832 IL20RA 6q23.3 interleukin 20 receptor, alpha 2 1
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Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018