View the Detailed Mosaic Information from PubMed ID: 28503910
Gene ID | Gene Symbol | Chr | Position |
---|---|---|---|
140775 | SMCR8 | 17 | 18220895 |
Ref | Alt | Genotype | Validated Method |
C | T | mosaic | PASM |
SSC ID | WES Depth | WES Alt Count | PASM Depth |
11685.s1 | 42 | 9 | 9783 |
PASM Maf | PASM MAF 95%CI lowerbound | PASM MAF 95%CI upperbound | Location |
0.2 | 0.192 | 0.208 | exonic |
iFish Probablity | iFish Prediction | SIFT | Phylop |
0.0406 | neutral | 0.52 | 0.211 |
Polyphen2_HDIV | Polyphen2_HVAR | MutationAssessor | GERP_RS |
0 | 0.002 | 0 | 2.41 |
dScore | CpG | Hydropathicity | Polarity |
0.7 | 0.8 | 1.2 |
Notes:
*iFish(Wang M, Wei L, PIMD: 27527004) is a supporting vector machine (SVM) based classifier which uses gene and gene family specific attributes. At the same time, iFish alsoprovides functional annotations from other classifiers such as: SIFT, Polyphen2, and MutationTaster2.
iFish utilized customized prediction cutoff for each classifier that maximizes the sum of sensitivity andspecificity.