View the Detailed Mosaic Information from PubMed ID: 28503910
Gene ID | Gene Symbol | Chr | Position |
---|---|---|---|
50831 | TAS2R3 | 7 | 141464483 |
Ref | Alt | Genotype | Validated Method |
G | T | mosaic | PASM |
SSC ID | WES Depth | WES Alt Count | PASM Depth |
11990.s1 | 183 | 10 | 9644 |
PASM Maf | PASM MAF 95%CI lowerbound | PASM MAF 95%CI upperbound | Location |
0.042 | 0.038 | 0.046 | exonic |
iFish Probablity | iFish Prediction | SIFT | Phylop |
0.0626 | neutral | 0.17 | -0.451 |
Polyphen2_HDIV | Polyphen2_HVAR | MutationAssessor | GERP_RS |
0.27 | 0.136 | 0.975 | 0.342 |
dScore | CpG | Hydropathicity | Polarity |
1.324 | 3.7 | -1.3 |
Notes:
*iFish(Wang M, Wei L, PIMD: 27527004) is a supporting vector machine (SVM) based classifier which uses gene and gene family specific attributes. At the same time, iFish alsoprovides functional annotations from other classifiers such as: SIFT, Polyphen2, and MutationTaster2.
iFish utilized customized prediction cutoff for each classifier that maximizes the sum of sensitivity andspecificity.