View the Detailed Mosaic Information from PubMed ID: 28503910
Gene ID | Gene Symbol | Chr | Position |
---|---|---|---|
84067 | FAM160A2 | 11 | 6239889 |
Ref | Alt | Genotype | Validated Method |
C | T | mosaic | PASM |
SSC ID | WES Depth | WES Alt Count | PASM Depth |
12044.s1 | 239 | 21 | 4096 |
PASM Maf | PASM MAF 95%CI lowerbound | PASM MAF 95%CI upperbound | Location |
0.065 | 0.057 | 0.073 | exonic |
iFish Probablity | iFish Prediction | SIFT | Phylop |
0.7735 | deleterious | 0.38 | 2.238 |
Polyphen2_HDIV | Polyphen2_HVAR | MutationAssessor | GERP_RS |
0.981 | 0.513 | 2.075 | 5.5 |
dScore | CpG | Hydropathicity | Polarity |
2.194 | 1.3 | -0.1 |
Notes:
*iFish(Wang M, Wei L, PIMD: 27527004) is a supporting vector machine (SVM) based classifier which uses gene and gene family specific attributes. At the same time, iFish alsoprovides functional annotations from other classifiers such as: SIFT, Polyphen2, and MutationTaster2.
iFish utilized customized prediction cutoff for each classifier that maximizes the sum of sensitivity andspecificity.